RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
PF4V1-201ENST00000226524 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
PF4V1-201ENST00000226524 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
PF4V1-201ENST00000226524 POTEAQ6S8J7 498 aa15.74■□□□□ 0.11
PF4V1-201ENST00000226524 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
PF4V1-201ENST00000226524 YTHDC2Q9H6S0 1430 aaKnown RBP15.74■□□□□ 0.11
PF4V1-201ENST00000226524 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
PF4V1-201ENST00000226524 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
PF4V1-201ENST00000226524 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
PF4V1-201ENST00000226524 SOS2Q07890 1332 aaPredicted RBP15.72■□□□□ 0.11
PF4V1-201ENST00000226524 TMEM132EQ6IEE7 984 aa15.72■□□□□ 0.11
PF4V1-201ENST00000226524 ORAI2Q96SN7 254 aa15.71■□□□□ 0.11
PF4V1-201ENST00000226524 LRP6O75581 1613 aa15.7■□□□□ 0.1
PF4V1-201ENST00000226524 WAPLQ7Z5K2 1190 aa15.7■□□□□ 0.1
PF4V1-201ENST00000226524 PNPLA6Q8IY17 1366 aa15.7■□□□□ 0.1
PF4V1-201ENST00000226524 CFAP70Q5T0N1 1121 aa15.69■□□□□ 0.1
PF4V1-201ENST00000226524 POGKQ9P215 609 aa15.69■□□□□ 0.1
PF4V1-201ENST00000226524 RXRBP28702 533 aa15.68■□□□□ 0.1
PF4V1-201ENST00000226524 DCAF11Q8TEB1 546 aa15.68■□□□□ 0.1
PF4V1-201ENST00000226524 DDX17Q92841 729 aaKnown RBP15.67■□□□□ 0.1
PF4V1-201ENST00000226524 EIF3AQ14152 1382 aaKnown RBP15.66■□□□□ 0.1
PF4V1-201ENST00000226524 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
PF4V1-201ENST00000226524 C8orf37Q96NL8 207 aa15.66■□□□□ 0.1
PF4V1-201ENST00000226524 AFF2P51816 1311 aa15.66■□□□□ 0.1
PF4V1-201ENST00000226524 DLC1Q96QB1 1528 aa15.65■□□□□ 0.1
PF4V1-201ENST00000226524 FOXO3O43524 673 aa15.65■□□□□ 0.1
PF4V1-201ENST00000226524 PSME1Q06323 249 aa15.65■□□□□ 0.1
PF4V1-201ENST00000226524 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
PF4V1-201ENST00000226524 KIF1AQ12756 1690 aa15.64■□□□□ 0.09
PF4V1-201ENST00000226524 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
PF4V1-201ENST00000226524 CDK12Q9NYV4 1490 aaPredicted RBP15.64■□□□□ 0.09
PF4V1-201ENST00000226524 FMN2Q9NZ56 1722 aa15.63■□□□□ 0.09
PF4V1-201ENST00000226524 PLEKHH1Q9ULM0 1364 aa15.62■□□□□ 0.09
PF4V1-201ENST00000226524 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
PF4V1-201ENST00000226524 ADAMTS2O95450 1211 aa15.62■□□□□ 0.09
PF4V1-201ENST00000226524 RBM6P78332 1123 aaKnown RBP15.62■□□□□ 0.09
PF4V1-201ENST00000226524 QTRT2Q9H974 415 aaKnown RBP15.61■□□□□ 0.09
PF4V1-201ENST00000226524 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
PF4V1-201ENST00000226524 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
PF4V1-201ENST00000226524 ANKARQ7Z5J8 1434 aa15.6■□□□□ 0.09
PF4V1-201ENST00000226524 TRAK1Q9UPV9 953 aa15.6■□□□□ 0.09
PF4V1-201ENST00000226524 PXDNQ92626 1479 aa15.59■□□□□ 0.09
PF4V1-201ENST00000226524 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
PF4V1-201ENST00000226524 KRT28Q7Z3Y7 464 aa15.59■□□□□ 0.09
PF4V1-201ENST00000226524 USP21Q9UK80 565 aa15.59■□□□□ 0.09
PF4V1-201ENST00000226524 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
PF4V1-201ENST00000226524 HAP1P54257 671 aaPredicted RBP15.58■□□□□ 0.08
PF4V1-201ENST00000226524 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
PF4V1-201ENST00000226524 ADGRB1O14514 1584 aa15.58■□□□□ 0.08
PF4V1-201ENST00000226524 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
PF4V1-201ENST00000226524 ADGRB2O60241 1585 aa15.57■□□□□ 0.08
PF4V1-201ENST00000226524 XPCQ01831 940 aaPredicted RBP15.56■□□□□ 0.08
PF4V1-201ENST00000226524 ARHGEF10O15013 1369 aa15.56■□□□□ 0.08
PF4V1-201ENST00000226524 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
PF4V1-201ENST00000226524 GPRASP1Q5JY77 1395 aa15.55■□□□□ 0.08
PF4V1-201ENST00000226524 WASLO00401 505 aaPredicted RBP15.54■□□□□ 0.08
PF4V1-201ENST00000226524 TNS3Q68CZ2 1445 aa15.53■□□□□ 0.08
PF4V1-201ENST00000226524 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.08
PF4V1-201ENST00000226524 MINK1Q8N4C8 1332 aaPredicted RBP15.52■□□□□ 0.08
PF4V1-201ENST00000226524 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
PF4V1-201ENST00000226524 HIRIP3Q9BW71 556 aaPredicted RBP15.51■□□□□ 0.07
PF4V1-201ENST00000226524 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
PF4V1-201ENST00000226524 NGDNQ8NEJ9 315 aaKnown RBP15.5■□□□□ 0.07
PF4V1-201ENST00000226524 PMFBP1Q8TBY8 1022 aa15.5■□□□□ 0.07
PF4V1-201ENST00000226524 UPF1Q92900 1129 aaKnown RBP eCLIP15.5■□□□□ 0.07
PF4V1-201ENST00000226524 MARF1Q9Y4F3 1742 aaKnown RBP15.5■□□□□ 0.07
PF4V1-201ENST00000226524 ATRNO75882 1429 aa15.49■□□□□ 0.07
PF4V1-201ENST00000226524 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
PF4V1-201ENST00000226524 UNC5CLQ8IV45 518 aa15.48■□□□□ 0.07
PF4V1-201ENST00000226524 ATAD2Q6PL18 1390 aa15.48■□□□□ 0.07
PF4V1-201ENST00000226524 RGS12O14924 1447 aa15.47■□□□□ 0.07
PF4V1-201ENST00000226524 GJD4Q96KN9 370 aaPredicted RBP15.47■□□□□ 0.07
PF4V1-201ENST00000226524 ITSN1Q15811 1721 aa15.46■□□□□ 0.07
PF4V1-201ENST00000226524 NUDT16Q96DE0 195 aaKnown RBP15.46■□□□□ 0.07
PF4V1-201ENST00000226524 USP32Q8NFA0 1604 aa15.46■□□□□ 0.06
PF4V1-201ENST00000226524 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.06
PF4V1-201ENST00000226524 ARHGEF28Q8N1W1 1705 aaKnown RBP15.46■□□□□ 0.06
PF4V1-201ENST00000226524 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
PF4V1-201ENST00000226524 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.44■□□□□ 0.06
PF4V1-201ENST00000226524 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
PF4V1-201ENST00000226524 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
PF4V1-201ENST00000226524 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
PF4V1-201ENST00000226524 SLIT2O94813 1529 aa15.43■□□□□ 0.06
PF4V1-201ENST00000226524 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
PF4V1-201ENST00000226524 PRR36Q9H6K5 1346 aa15.43■□□□□ 0.06
PF4V1-201ENST00000226524 VPS72Q15906 364 aa15.41■□□□□ 0.06
PF4V1-201ENST00000226524 CABLES1Q8TDN4 633 aa15.41■□□□□ 0.06
PF4V1-201ENST00000226524 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
PF4V1-201ENST00000226524 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
PF4V1-201ENST00000226524 ATP7BP35670 1465 aa15.4■□□□□ 0.06
PF4V1-201ENST00000226524 NWD2Q9ULI1 1742 aa15.4■□□□□ 0.06
PF4V1-201ENST00000226524 SRPK2P78362 688 aaKnown RBP15.4■□□□□ 0.06
PF4V1-201ENST00000226524 NBPF1Q3BBV0 1214 aa15.4■□□□□ 0.06
PF4V1-201ENST00000226524 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
PF4V1-201ENST00000226524 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
PF4V1-201ENST00000226524 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
PF4V1-201ENST00000226524 POLR3AO14802 1390 aaPredicted RBP15.38■□□□□ 0.05
PF4V1-201ENST00000226524 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
PF4V1-201ENST00000226524 PLEKHG5O94827 1062 aa15.38■□□□□ 0.05
PF4V1-201ENST00000226524 NBPF8Q3BBV2 869 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms