RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 KANK1Q14678 1352 aa19.76■□□□□ 0.75
VTN-201ENST00000226218 CHD1O14646 1710 aa19.76■□□□□ 0.75
VTN-201ENST00000226218 FSD2A1L4K1 749 aa19.76■□□□□ 0.75
VTN-201ENST00000226218 EIF5BO60841 1220 aaKnown RBP19.76■□□□□ 0.75
VTN-201ENST00000226218 KIF1BO60333 1816 aa19.75■□□□□ 0.75
VTN-201ENST00000226218 NRXN1Q9ULB1 1477 aa19.75■□□□□ 0.75
VTN-201ENST00000226218 TNNQ9UQP3 1299 aa19.75■□□□□ 0.75
VTN-201ENST00000226218 ZCCHC11Q5TAX3 1644 aaKnown RBP19.74■□□□□ 0.75
VTN-201ENST00000226218 MROH2AA6NES4 1674 aa19.73■□□□□ 0.75
VTN-201ENST00000226218 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
VTN-201ENST00000226218 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
VTN-201ENST00000226218 RUNDC1Q96C34 613 aa19.73■□□□□ 0.75
VTN-201ENST00000226218 WDR63Q8IWG1 891 aa19.72■□□□□ 0.75
VTN-201ENST00000226218 MROH1Q8NDA8 1641 aa19.72■□□□□ 0.75
VTN-201ENST00000226218 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
VTN-201ENST00000226218 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
VTN-201ENST00000226218 INO80Q9ULG1 1556 aaPredicted RBP19.71■□□□□ 0.75
VTN-201ENST00000226218 SETBP1Q9Y6X0 1596 aa19.71■□□□□ 0.75
VTN-201ENST00000226218 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
VTN-201ENST00000226218 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
VTN-201ENST00000226218 ADGRB2O60241 1585 aa19.71■□□□□ 0.75
VTN-201ENST00000226218 XRCC6P12956 609 aaKnown RBP eCLIP19.7■□□□□ 0.74
VTN-201ENST00000226218 UGGT1Q9NYU2 1555 aa19.7■□□□□ 0.74
VTN-201ENST00000226218 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
VTN-201ENST00000226218 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
VTN-201ENST00000226218 MCM4P33991 863 aa19.69■□□□□ 0.74
VTN-201ENST00000226218 NSD3Q9BZ95 1437 aa19.69■□□□□ 0.74
VTN-201ENST00000226218 TCP11L2Q8N4U5 519 aa19.69■□□□□ 0.74
VTN-201ENST00000226218 ADGRF5Q8IZF2 1346 aa19.68■□□□□ 0.74
VTN-201ENST00000226218 RWDD1Q9H446 243 aaPredicted RBP19.68■□□□□ 0.74
VTN-201ENST00000226218 SPAG9O60271 1321 aaKnown RBP19.68■□□□□ 0.74
VTN-201ENST00000226218 QRICH2Q9H0J4 1663 aa19.67■□□□□ 0.74
VTN-201ENST00000226218 RRP7AQ9Y3A4 280 aaKnown RBP19.67■□□□□ 0.74
VTN-201ENST00000226218 GOLGA6L3A6NEY3 463 aa19.66■□□□□ 0.74
VTN-201ENST00000226218 ADGRL1O94910 1474 aa19.65■□□□□ 0.74
VTN-201ENST00000226218 MVPQ14764 893 aaKnown RBP19.65■□□□□ 0.74
VTN-201ENST00000226218 ATP7AQ04656 1500 aa19.65■□□□□ 0.74
VTN-201ENST00000226218 NCOA3Q9Y6Q9 1424 aa19.64■□□□□ 0.74
VTN-201ENST00000226218 EFCAB6Q5THR3 1501 aa19.64■□□□□ 0.73
VTN-201ENST00000226218 CHMP5Q9NZZ3 219 aa19.64■□□□□ 0.73
VTN-201ENST00000226218 UHRF1BP1LA0JNW5 1464 aa19.63■□□□□ 0.73
VTN-201ENST00000226218 NEUROD2Q15784 382 aa19.63■□□□□ 0.73
VTN-201ENST00000226218 MORC1Q86VD1 984 aa19.63■□□□□ 0.73
VTN-201ENST00000226218 ZNF692Q9BU19 519 aaPredicted RBP19.63■□□□□ 0.73
VTN-201ENST00000226218 BCL2L13Q9BXK5 485 aa19.63■□□□□ 0.73
VTN-201ENST00000226218 ADGRB3O60242 1522 aa19.62■□□□□ 0.73
VTN-201ENST00000226218 CLCN1P35523 988 aa19.61■□□□□ 0.73
VTN-201ENST00000226218 C22orf23Q9BZE7 217 aa19.61■□□□□ 0.73
VTN-201ENST00000226218 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
VTN-201ENST00000226218 PANK2Q9BZ23 570 aa19.61■□□□□ 0.73
VTN-201ENST00000226218 PPRC1Q5VV67 1664 aaKnown RBP19.6■□□□□ 0.73
VTN-201ENST00000226218 PPLO60437 1756 aa19.6■□□□□ 0.73
VTN-201ENST00000226218 ADGRB1O14514 1584 aa19.6■□□□□ 0.73
VTN-201ENST00000226218 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
VTN-201ENST00000226218 TRAK2O60296 914 aa19.59■□□□□ 0.73
VTN-201ENST00000226218 DDIT3P35638 169 aa19.59■□□□□ 0.73
VTN-201ENST00000226218 HDAC1Q13547 482 aaPredicted RBP19.59■□□□□ 0.73
VTN-201ENST00000226218 MYH16Q9H6N6 1097 aa19.59■□□□□ 0.73
VTN-201ENST00000226218 ZKSCAN2Q63HK3 967 aa19.58■□□□□ 0.73
VTN-201ENST00000226218 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.72
VTN-201ENST00000226218 DZIP1LQ8IYY4 767 aaKnown RBP19.57■□□□□ 0.72
VTN-201ENST00000226218 SPRYD3Q8NCJ5 442 aa19.57■□□□□ 0.72
VTN-201ENST00000226218 LMTK2Q8IWU2 1503 aa19.56■□□□□ 0.72
VTN-201ENST00000226218 FANCAO15360 1455 aa19.56■□□□□ 0.72
VTN-201ENST00000226218 MTHFSP49914 203 aa19.56■□□□□ 0.72
VTN-201ENST00000226218 MRE11P49959 708 aa19.56■□□□□ 0.72
VTN-201ENST00000226218 SLC12A5Q9H2X9 1139 aa19.55■□□□□ 0.72
VTN-201ENST00000226218 NOS1P29475 1434 aa19.55■□□□□ 0.72
VTN-201ENST00000226218 MFAP1P55081 439 aaKnown RBP19.55■□□□□ 0.72
VTN-201ENST00000226218 SMC5Q8IY18 1101 aa19.55■□□□□ 0.72
VTN-201ENST00000226218 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
VTN-201ENST00000226218 TNNT2P45379 298 aaPredicted RBP19.54■□□□□ 0.72
VTN-201ENST00000226218 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
VTN-201ENST00000226218 DDX11L8A8MPP1 907 aa19.53■□□□□ 0.72
VTN-201ENST00000226218 NSD2O96028 1365 aa19.53■□□□□ 0.72
VTN-201ENST00000226218 CD109Q6YHK3 1445 aa19.52■□□□□ 0.72
VTN-201ENST00000226218 CFAP53Q96M91 514 aa19.52■□□□□ 0.72
VTN-201ENST00000226218 TRIM27P14373 513 aa19.52■□□□□ 0.72
VTN-201ENST00000226218 RBM25P49756 843 aaKnown RBP19.52■□□□□ 0.72
VTN-201ENST00000226218 SNX21Q969T3 373 aa19.52■□□□□ 0.72
VTN-201ENST00000226218 KIF3BO15066 747 aa19.51■□□□□ 0.71
VTN-201ENST00000226218 FTSJ3Q8IY81 847 aaKnown RBP19.51■□□□□ 0.71
VTN-201ENST00000226218 ARXQ96QS3 562 aa19.51■□□□□ 0.71
VTN-201ENST00000226218 PNNQ9H307 717 aaKnown RBP19.51■□□□□ 0.71
VTN-201ENST00000226218 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
VTN-201ENST00000226218 ARHGEF28Q8N1W1 1705 aaKnown RBP19.5■□□□□ 0.71
VTN-201ENST00000226218 HSCBQ8IWL3 235 aa19.5■□□□□ 0.71
VTN-201ENST00000226218 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
VTN-201ENST00000226218 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
VTN-201ENST00000226218 COL3A1P02461 1466 aaPredicted RBP19.5■□□□□ 0.71
VTN-201ENST00000226218 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
VTN-201ENST00000226218 CFAP74Q9C0B2 1584 aa19.49■□□□□ 0.71
VTN-201ENST00000226218 PUS7Q96PZ0 661 aaKnown RBP19.48■□□□□ 0.71
VTN-201ENST00000226218 KIDINS220Q9ULH0 1771 aa19.48■□□□□ 0.71
VTN-201ENST00000226218 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
VTN-201ENST00000226218 GLI2P10070 1586 aa19.47■□□□□ 0.71
VTN-201ENST00000226218 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
VTN-201ENST00000226218 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
VTN-201ENST00000226218 SSH1Q8WYL5 1049 aa19.47■□□□□ 0.71
VTN-201ENST00000226218 TSR2Q969E8 191 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms