RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 NSD3Q9BZ95 1437 aa15.95■□□□□ 0.14
PITRM1-201ENST00000224949 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
PITRM1-201ENST00000224949 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
PITRM1-201ENST00000224949 UNC13BO14795 1591 aa15.94■□□□□ 0.14
PITRM1-201ENST00000224949 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
PITRM1-201ENST00000224949 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
PITRM1-201ENST00000224949 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
PITRM1-201ENST00000224949 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
PITRM1-201ENST00000224949 TTC37Q6PGP7 1564 aa15.94■□□□□ 0.14
PITRM1-201ENST00000224949 LNPKQ9C0E8 428 aa15.93■□□□□ 0.14
PITRM1-201ENST00000224949 MAST1Q9Y2H9 1570 aa15.93■□□□□ 0.14
PITRM1-201ENST00000224949 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
PITRM1-201ENST00000224949 VSIG10Q8N0Z9 540 aa15.93■□□□□ 0.14
PITRM1-201ENST00000224949 IQGAP3Q86VI3 1631 aa15.93■□□□□ 0.14
PITRM1-201ENST00000224949 DUOX2Q9NRD8 1548 aa15.92■□□□□ 0.14
PITRM1-201ENST00000224949 GLIPR1L2Q4G1C9 344 aa15.92■□□□□ 0.14
PITRM1-201ENST00000224949 GRPEL1Q9HAV7 217 aa15.92■□□□□ 0.14
PITRM1-201ENST00000224949 NPC1L1Q9UHC9 1359 aa15.92■□□□□ 0.14
PITRM1-201ENST00000224949 MRE11P49959 708 aa15.92■□□□□ 0.14
PITRM1-201ENST00000224949 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
PITRM1-201ENST00000224949 MADDQ8WXG6 1647 aa15.91■□□□□ 0.14
PITRM1-201ENST00000224949 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
PITRM1-201ENST00000224949 TRAPPC8Q9Y2L5 1435 aa15.9■□□□□ 0.14
PITRM1-201ENST00000224949 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
PITRM1-201ENST00000224949 FSD2A1L4K1 749 aa15.89■□□□□ 0.13
PITRM1-201ENST00000224949 DDX11L8A8MPP1 907 aa15.89■□□□□ 0.13
PITRM1-201ENST00000224949 RNF17Q9BXT8 1623 aaKnown RBP15.89■□□□□ 0.13
PITRM1-201ENST00000224949 TRIM27P14373 513 aa15.89■□□□□ 0.13
PITRM1-201ENST00000224949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.13
PITRM1-201ENST00000224949 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
PITRM1-201ENST00000224949 KANK1Q14678 1352 aa15.89■□□□□ 0.13
PITRM1-201ENST00000224949 CLCN1P35523 988 aa15.88■□□□□ 0.13
PITRM1-201ENST00000224949 SSH1Q8WYL5 1049 aa15.88■□□□□ 0.13
PITRM1-201ENST00000224949 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
PITRM1-201ENST00000224949 KDM5AP29375 1690 aaKnown RBP15.88■□□□□ 0.13
PITRM1-201ENST00000224949 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
PITRM1-201ENST00000224949 ATP10AO60312 1499 aa15.87■□□□□ 0.13
PITRM1-201ENST00000224949 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
PITRM1-201ENST00000224949 ESPNB1AK53 854 aa15.87■□□□□ 0.13
PITRM1-201ENST00000224949 AAMPQ13685 434 aa15.87■□□□□ 0.13
PITRM1-201ENST00000224949 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
PITRM1-201ENST00000224949 SCAPERQ9BY12 1400 aa15.86■□□□□ 0.13
PITRM1-201ENST00000224949 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
PITRM1-201ENST00000224949 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
PITRM1-201ENST00000224949 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
PITRM1-201ENST00000224949 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
PITRM1-201ENST00000224949 MYOM1P52179 1685 aa15.85■□□□□ 0.13
PITRM1-201ENST00000224949 C1orf115Q9H7X2 142 aa15.85■□□□□ 0.13
PITRM1-201ENST00000224949 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
PITRM1-201ENST00000224949 STAC3Q96MF2 364 aa15.84■□□□□ 0.13
PITRM1-201ENST00000224949 GBP4Q96PP9 640 aa15.84■□□□□ 0.13
PITRM1-201ENST00000224949 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
PITRM1-201ENST00000224949 ANKRD45Q5TZF3 282 aa15.84■□□□□ 0.13
PITRM1-201ENST00000224949 ERBB4Q15303 1308 aa15.83■□□□□ 0.13
PITRM1-201ENST00000224949 GAS2L3Q86XJ1 694 aa15.83■□□□□ 0.12
PITRM1-201ENST00000224949 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.12
PITRM1-201ENST00000224949 CABP2Q9NPB3 220 aa15.83■□□□□ 0.12
PITRM1-201ENST00000224949 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
PITRM1-201ENST00000224949 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
PITRM1-201ENST00000224949 ELL2O00472 640 aaPredicted RBP15.81■□□□□ 0.12
PITRM1-201ENST00000224949 STK26Q9P289 416 aa15.81■□□□□ 0.12
PITRM1-201ENST00000224949 PLXNC1O60486 1568 aa15.81■□□□□ 0.12
PITRM1-201ENST00000224949 RIPK4P57078 832 aa15.81■□□□□ 0.12
PITRM1-201ENST00000224949 PKNOX2Q96KN3 472 aa15.81■□□□□ 0.12
PITRM1-201ENST00000224949 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
PITRM1-201ENST00000224949 TMPOP42166 694 aaKnown RBP15.79■□□□□ 0.12
PITRM1-201ENST00000224949 GGT6Q6P531 493 aa15.79■□□□□ 0.12
PITRM1-201ENST00000224949 CEP152O94986 1710 aa15.79■□□□□ 0.12
PITRM1-201ENST00000224949 SRPK2P78362 688 aaKnown RBP15.79■□□□□ 0.12
PITRM1-201ENST00000224949 PTPRTO14522 1441 aa15.79■□□□□ 0.12
PITRM1-201ENST00000224949 TRPM2O94759 1503 aa15.79■□□□□ 0.12
PITRM1-201ENST00000224949 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
PITRM1-201ENST00000224949 HDAC1Q13547 482 aaPredicted RBP15.78■□□□□ 0.12
PITRM1-201ENST00000224949 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
PITRM1-201ENST00000224949 PLCH2O75038 1416 aa15.78■□□□□ 0.12
PITRM1-201ENST00000224949 SSFA2P28290 1259 aa15.78■□□□□ 0.12
PITRM1-201ENST00000224949 NOS1P29475 1434 aa15.78■□□□□ 0.12
PITRM1-201ENST00000224949 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
PITRM1-201ENST00000224949 SPHKAPQ2M3C7 1700 aa15.78■□□□□ 0.12
PITRM1-201ENST00000224949 CHD1LQ86WJ1 897 aa15.78■□□□□ 0.12
PITRM1-201ENST00000224949 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
PITRM1-201ENST00000224949 GOLGA6L22H0YM25 854 aa15.77■□□□□ 0.12
PITRM1-201ENST00000224949 CCDC27Q2M243 656 aa15.77■□□□□ 0.12
PITRM1-201ENST00000224949 SMC5Q8IY18 1101 aa15.77■□□□□ 0.12
PITRM1-201ENST00000224949 IPO8O15397 1037 aaKnown RBP15.77■□□□□ 0.11
PITRM1-201ENST00000224949 RTEL1-TNFRSF6BF6WH68 1400 aa15.76■□□□□ 0.11
PITRM1-201ENST00000224949 ZMYND15Q9H091 742 aa15.76■□□□□ 0.11
PITRM1-201ENST00000224949 ARID3AQ99856 593 aa15.76■□□□□ 0.11
PITRM1-201ENST00000224949 APBB1O00213 710 aa15.75■□□□□ 0.11
PITRM1-201ENST00000224949 NASPP49321 788 aaPredicted RBP15.75■□□□□ 0.11
PITRM1-201ENST00000224949 ZBTB40Q9NUA8 1239 aa15.75■□□□□ 0.11
PITRM1-201ENST00000224949 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
PITRM1-201ENST00000224949 NUCB1Q02818 461 aa15.74■□□□□ 0.11
PITRM1-201ENST00000224949 THUMPD2Q9BTF0 503 aaKnown RBP15.74■□□□□ 0.11
PITRM1-201ENST00000224949 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
PITRM1-201ENST00000224949 ZBTB7CA1YPR0 619 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 K7ELQ4 463 aaPredicted RBP15.73■□□□□ 0.11
PITRM1-201ENST00000224949 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
PITRM1-201ENST00000224949 RAB3GAP1Q15042 981 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms