RNA–Protein interactions for RNA: ENST00000223423.8

PTGS1-201, Transcript of prostaglandin-endoperoxide synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTGS1, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGS1-201ENST00000223423 SAFB2Q14151 953 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTGS1-201ENST00000223423 C3P01024 1663 aa16.68■□□□□ 0.26
PTGS1-201ENST00000223423 PUS7Q96PZ0 661 aaKnown RBP16.68■□□□□ 0.26
PTGS1-201ENST00000223423 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
PTGS1-201ENST00000223423 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
PTGS1-201ENST00000223423 PTPRMP28827 1452 aa16.67■□□□□ 0.26
PTGS1-201ENST00000223423 CABP2Q9NPB3 220 aa16.67■□□□□ 0.26
PTGS1-201ENST00000223423 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
PTGS1-201ENST00000223423 ALKQ9UM73 1620 aa16.66■□□□□ 0.26
PTGS1-201ENST00000223423 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
PTGS1-201ENST00000223423 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
PTGS1-201ENST00000223423 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
PTGS1-201ENST00000223423 RIMS2Q9UQ26 1411 aa16.63■□□□□ 0.25
PTGS1-201ENST00000223423 PLEKHH1Q9ULM0 1364 aa16.63■□□□□ 0.25
PTGS1-201ENST00000223423 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
PTGS1-201ENST00000223423 MORC1Q86VD1 984 aa16.62■□□□□ 0.25
PTGS1-201ENST00000223423 USP32Q8NFA0 1604 aa16.61■□□□□ 0.25
PTGS1-201ENST00000223423 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
PTGS1-201ENST00000223423 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
PTGS1-201ENST00000223423 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
PTGS1-201ENST00000223423 POGKQ9P215 609 aa16.61■□□□□ 0.25
PTGS1-201ENST00000223423 CGNL1Q0VF96 1302 aa16.6■□□□□ 0.25
PTGS1-201ENST00000223423 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
PTGS1-201ENST00000223423 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
PTGS1-201ENST00000223423 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
PTGS1-201ENST00000223423 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
PTGS1-201ENST00000223423 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
PTGS1-201ENST00000223423 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
PTGS1-201ENST00000223423 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
PTGS1-201ENST00000223423 APAF1O14727 1248 aa16.56■□□□□ 0.24
PTGS1-201ENST00000223423 ATAD2Q6PL18 1390 aa16.55■□□□□ 0.24
PTGS1-201ENST00000223423 NSD2O96028 1365 aa16.55■□□□□ 0.24
PTGS1-201ENST00000223423 TNRQ92752 1358 aa16.55■□□□□ 0.24
PTGS1-201ENST00000223423 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
PTGS1-201ENST00000223423 DUSP27Q5VZP5 1158 aa16.54■□□□□ 0.24
PTGS1-201ENST00000223423 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
PTGS1-201ENST00000223423 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
PTGS1-201ENST00000223423 DLC1Q96QB1 1528 aa16.54■□□□□ 0.24
PTGS1-201ENST00000223423 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
PTGS1-201ENST00000223423 MTHFSP49914 203 aa16.53■□□□□ 0.24
PTGS1-201ENST00000223423 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
PTGS1-201ENST00000223423 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
PTGS1-201ENST00000223423 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTGS1-201ENST00000223423 SHPRHQ149N8 1683 aa16.53■□□□□ 0.24
PTGS1-201ENST00000223423 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.24
PTGS1-201ENST00000223423 METP08581 1390 aa16.52■□□□□ 0.24
PTGS1-201ENST00000223423 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.23
PTGS1-201ENST00000223423 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.23
PTGS1-201ENST00000223423 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
PTGS1-201ENST00000223423 PLIN1O60240 522 aa16.5■□□□□ 0.23
PTGS1-201ENST00000223423 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
PTGS1-201ENST00000223423 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
PTGS1-201ENST00000223423 TRMT2AQ8IZ69 625 aaKnown RBP16.49■□□□□ 0.23
PTGS1-201ENST00000223423 GGNBP2Q9H3C7 697 aa16.49■□□□□ 0.23
PTGS1-201ENST00000223423 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
PTGS1-201ENST00000223423 FYB1O15117 783 aa16.48■□□□□ 0.23
PTGS1-201ENST00000223423 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
PTGS1-201ENST00000223423 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
PTGS1-201ENST00000223423 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
PTGS1-201ENST00000223423 HSPA2P54652 639 aa16.47■□□□□ 0.23
PTGS1-201ENST00000223423 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
PTGS1-201ENST00000223423 UBR1Q8IWV7 1749 aa16.46■□□□□ 0.23
PTGS1-201ENST00000223423 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
PTGS1-201ENST00000223423 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
PTGS1-201ENST00000223423 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
PTGS1-201ENST00000223423 NGEFQ8N5V2 710 aa16.45■□□□□ 0.22
PTGS1-201ENST00000223423 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
PTGS1-201ENST00000223423 MED14O60244 1454 aa16.44■□□□□ 0.22
PTGS1-201ENST00000223423 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
PTGS1-201ENST00000223423 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
PTGS1-201ENST00000223423 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
PTGS1-201ENST00000223423 E9PSI1 815 aa16.43■□□□□ 0.22
PTGS1-201ENST00000223423 TECPR2O15040 1411 aa16.43■□□□□ 0.22
PTGS1-201ENST00000223423 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
PTGS1-201ENST00000223423 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
PTGS1-201ENST00000223423 TCP11L2Q8N4U5 519 aa16.42■□□□□ 0.22
PTGS1-201ENST00000223423 RRP7AQ9Y3A4 280 aaKnown RBP16.42■□□□□ 0.22
PTGS1-201ENST00000223423 LTKP29376 864 aa16.42■□□□□ 0.22
PTGS1-201ENST00000223423 CRBNQ96SW2 442 aa16.42■□□□□ 0.22
PTGS1-201ENST00000223423 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
PTGS1-201ENST00000223423 FAM135BQ49AJ0 1406 aa16.41■□□□□ 0.22
PTGS1-201ENST00000223423 ADAMTS13Q76LX8 1427 aa16.41■□□□□ 0.22
PTGS1-201ENST00000223423 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
PTGS1-201ENST00000223423 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
PTGS1-201ENST00000223423 ANKRD26Q9UPS8 1709 aa16.41■□□□□ 0.22
PTGS1-201ENST00000223423 ATP7BP35670 1465 aa16.41■□□□□ 0.22
PTGS1-201ENST00000223423 KNDC1Q76NI1 1749 aa16.4■□□□□ 0.22
PTGS1-201ENST00000223423 CEP170BQ9Y4F5 1589 aaPredicted RBP16.4■□□□□ 0.22
PTGS1-201ENST00000223423 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
PTGS1-201ENST00000223423 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTGS1-201ENST00000223423 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
PTGS1-201ENST00000223423 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
PTGS1-201ENST00000223423 CPS1P31327 1500 aa16.4■□□□□ 0.22
PTGS1-201ENST00000223423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTGS1-201ENST00000223423 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
PTGS1-201ENST00000223423 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
PTGS1-201ENST00000223423 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
PTGS1-201ENST00000223423 NCKAP5LQ9HCH0 1330 aa16.37■□□□□ 0.21
PTGS1-201ENST00000223423 CPSF1Q10570 1443 aaKnown RBP16.37■□□□□ 0.21
PTGS1-201ENST00000223423 NUDT16Q96DE0 195 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms