RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
CACTIN-201ENST00000221899 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
CACTIN-201ENST00000221899 ADGRL1O94910 1474 aa23.77■■□□□ 1.4
CACTIN-201ENST00000221899 PCDHB15Q9Y5E8 787 aa23.77■■□□□ 1.4
CACTIN-201ENST00000221899 NINLQ9Y2I6 1382 aa23.76■■□□□ 1.39
CACTIN-201ENST00000221899 ARAP3Q8WWN8 1544 aa23.76■■□□□ 1.39
CACTIN-201ENST00000221899 MTHFSP49914 203 aa23.75■■□□□ 1.39
CACTIN-201ENST00000221899 SLKQ9H2G2 1235 aaPredicted RBP23.75■■□□□ 1.39
CACTIN-201ENST00000221899 SHPRHQ149N8 1683 aa23.75■■□□□ 1.39
CACTIN-201ENST00000221899 VIRMAQ69YN4 1812 aaKnown RBP23.74■■□□□ 1.39
CACTIN-201ENST00000221899 EFCAB6Q5THR3 1501 aa23.72■■□□□ 1.39
CACTIN-201ENST00000221899 NEURL4Q96JN8 1562 aa23.72■■□□□ 1.39
CACTIN-201ENST00000221899 SBNO2Q9Y2G9 1366 aa23.72■■□□□ 1.39
CACTIN-201ENST00000221899 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
CACTIN-201ENST00000221899 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
CACTIN-201ENST00000221899 PPRC1Q5VV67 1664 aaKnown RBP23.71■■□□□ 1.39
CACTIN-201ENST00000221899 NUTM2DQ5VT03 806 aaPredicted RBP23.71■■□□□ 1.39
CACTIN-201ENST00000221899 PMFBP1Q8TBY8 1022 aa23.7■■□□□ 1.39
CACTIN-201ENST00000221899 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.38
CACTIN-201ENST00000221899 CFAP65Q6ZU64 1925 aaKnown RBP23.7■■□□□ 1.38
CACTIN-201ENST00000221899 PDZRN3Q9UPQ7 1066 aa23.7■■□□□ 1.38
CACTIN-201ENST00000221899 NRXN1Q9ULB1 1477 aa23.7■■□□□ 1.38
CACTIN-201ENST00000221899 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
CACTIN-201ENST00000221899 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
CACTIN-201ENST00000221899 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
CACTIN-201ENST00000221899 BECN1Q14457 450 aa23.68■■□□□ 1.38
CACTIN-201ENST00000221899 WDR63Q8IWG1 891 aa23.67■■□□□ 1.38
CACTIN-201ENST00000221899 PHF23Q9BUL5 403 aaPredicted RBP23.67■■□□□ 1.38
CACTIN-201ENST00000221899 U2AF1L5P0DN76 240 aaPredicted RBP23.67■■□□□ 1.38
CACTIN-201ENST00000221899 U2AF1Q01081 240 aaKnown RBP eCLIP23.67■■□□□ 1.38
CACTIN-201ENST00000221899 GGT6Q6P531 493 aa23.67■■□□□ 1.38
CACTIN-201ENST00000221899 CFAP53Q96M91 514 aa23.67■■□□□ 1.38
CACTIN-201ENST00000221899 NLRP1Q9C000 1473 aa23.67■■□□□ 1.38
CACTIN-201ENST00000221899 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
CACTIN-201ENST00000221899 QRICH2Q9H0J4 1663 aa23.66■■□□□ 1.38
CACTIN-201ENST00000221899 POGKQ9P215 609 aa23.65■■□□□ 1.38
CACTIN-201ENST00000221899 ADGRB3O60242 1522 aa23.64■■□□□ 1.38
CACTIN-201ENST00000221899 ZNF518AQ6AHZ1 1483 aa23.64■■□□□ 1.37
CACTIN-201ENST00000221899 SAFB2Q14151 953 aaKnown RBP eCLIP23.63■■□□□ 1.37
CACTIN-201ENST00000221899 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
CACTIN-201ENST00000221899 UPF2Q9HAU5 1272 aaKnown RBP23.63■■□□□ 1.37
CACTIN-201ENST00000221899 RWDD1Q9H446 243 aaPredicted RBP23.62■■□□□ 1.37
CACTIN-201ENST00000221899 SETBP1Q9Y6X0 1596 aa23.62■■□□□ 1.37
CACTIN-201ENST00000221899 MYH16Q9H6N6 1097 aa23.62■■□□□ 1.37
CACTIN-201ENST00000221899 KIDINS220Q9ULH0 1771 aa23.61■■□□□ 1.37
CACTIN-201ENST00000221899 SPRYD3Q8NCJ5 442 aa23.61■■□□□ 1.37
CACTIN-201ENST00000221899 FTSJ3Q8IY81 847 aaKnown RBP23.6■■□□□ 1.37
CACTIN-201ENST00000221899 TBC1D32Q96NH3 1257 aa23.6■■□□□ 1.37
CACTIN-201ENST00000221899 CABP2Q9NPB3 220 aa23.6■■□□□ 1.37
CACTIN-201ENST00000221899 NPATQ14207 1427 aa23.6■■□□□ 1.37
CACTIN-201ENST00000221899 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
CACTIN-201ENST00000221899 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
CACTIN-201ENST00000221899 MVPQ14764 893 aaKnown RBP23.59■■□□□ 1.37
CACTIN-201ENST00000221899 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
CACTIN-201ENST00000221899 TBC1D2Q9BYX2 928 aa23.58■■□□□ 1.37
CACTIN-201ENST00000221899 ZKSCAN2Q63HK3 967 aa23.57■■□□□ 1.36
CACTIN-201ENST00000221899 U2SURPO15042 1029 aaKnown RBP23.57■■□□□ 1.36
CACTIN-201ENST00000221899 AAMPQ13685 434 aa23.57■■□□□ 1.36
CACTIN-201ENST00000221899 PPLO60437 1756 aa23.56■■□□□ 1.36
CACTIN-201ENST00000221899 DZIP1LQ8IYY4 767 aaKnown RBP23.56■■□□□ 1.36
CACTIN-201ENST00000221899 ANTXR1Q9H6X2 564 aa23.56■■□□□ 1.36
CACTIN-201ENST00000221899 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
CACTIN-201ENST00000221899 SMC4Q9NTJ3 1288 aa23.55■■□□□ 1.36
CACTIN-201ENST00000221899 EVC2Q86UK5 1308 aa23.55■■□□□ 1.36
CACTIN-201ENST00000221899 LMTK2Q8IWU2 1503 aa23.55■■□□□ 1.36
CACTIN-201ENST00000221899 EXOSC9Q06265 439 aaKnown RBP23.54■■□□□ 1.36
CACTIN-201ENST00000221899 ARXQ96QS3 562 aa23.52■■□□□ 1.36
CACTIN-201ENST00000221899 ANKRD36BQ8N2N9 1353 aa23.52■■□□□ 1.36
CACTIN-201ENST00000221899 GGNBP2Q9H3C7 697 aa23.52■■□□□ 1.36
CACTIN-201ENST00000221899 MFAP1P55081 439 aaKnown RBP23.52■■□□□ 1.35
CACTIN-201ENST00000221899 ITPRIPQ8IWB1 547 aa23.52■■□□□ 1.35
CACTIN-201ENST00000221899 STK26Q9P289 416 aa23.51■■□□□ 1.35
CACTIN-201ENST00000221899 TULP4Q9NRJ4 1543 aa23.51■■□□□ 1.35
CACTIN-201ENST00000221899 TRIM27P14373 513 aa23.51■■□□□ 1.35
CACTIN-201ENST00000221899 USP32Q8NFA0 1604 aa23.5■■□□□ 1.35
CACTIN-201ENST00000221899 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
CACTIN-201ENST00000221899 GLI2P10070 1586 aa23.49■■□□□ 1.35
CACTIN-201ENST00000221899 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
CACTIN-201ENST00000221899 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
CACTIN-201ENST00000221899 RPGRIP1LQ68CZ1 1315 aa23.47■■□□□ 1.35
CACTIN-201ENST00000221899 CD109Q6YHK3 1445 aa23.47■■□□□ 1.35
CACTIN-201ENST00000221899 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
CACTIN-201ENST00000221899 ZMYM3Q14202 1370 aa23.46■■□□□ 1.35
CACTIN-201ENST00000221899 C22orf23Q9BZE7 217 aa23.46■■□□□ 1.35
CACTIN-201ENST00000221899 A0A1W2PP64 1363 aa23.46■■□□□ 1.35
CACTIN-201ENST00000221899 PLEKHF1Q96S99 279 aa23.46■■□□□ 1.35
CACTIN-201ENST00000221899 NOB1Q9ULX3 412 aaKnown RBP23.46■■□□□ 1.35
CACTIN-201ENST00000221899 NSD2O96028 1365 aa23.45■■□□□ 1.35
CACTIN-201ENST00000221899 ADGRB2O60241 1585 aa23.45■■□□□ 1.34
CACTIN-201ENST00000221899 FRMPD1Q5SYB0 1578 aa23.44■■□□□ 1.34
CACTIN-201ENST00000221899 PRKCSHP14314 528 aaPredicted RBP23.44■■□□□ 1.34
CACTIN-201ENST00000221899 VGFO15240 615 aaPredicted RBP23.44■■□□□ 1.34
CACTIN-201ENST00000221899 ATF7IPQ6VMQ6 1270 aa23.43■■□□□ 1.34
CACTIN-201ENST00000221899 ARHGEF28Q8N1W1 1705 aaKnown RBP23.43■■□□□ 1.34
CACTIN-201ENST00000221899 TMEM57Q8N5G2 664 aa23.42■■□□□ 1.34
CACTIN-201ENST00000221899 DDX19BQ9UMR2 479 aa23.42■■□□□ 1.34
CACTIN-201ENST00000221899 GZF1Q9H116 711 aaPredicted RBP23.42■■□□□ 1.34
CACTIN-201ENST00000221899 RIPK4P57078 832 aa23.41■■□□□ 1.34
CACTIN-201ENST00000221899 CT47B1P0C2W7 299 aaPredicted RBP23.4■■□□□ 1.34
CACTIN-201ENST00000221899 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms