RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 NSD3Q9BZ95 1437 aa27.53■■■□□ 2
CCDC130-201ENST00000221554 MORC1Q86VD1 984 aa27.53■■■□□ 2
CCDC130-201ENST00000221554 NSD2O96028 1365 aa27.53■■■□□ 2
CCDC130-201ENST00000221554 PLIN1O60240 522 aa27.52■■■□□ 2
CCDC130-201ENST00000221554 NKTRP30414 1462 aaKnown RBP27.51■■□□□ 1.99
CCDC130-201ENST00000221554 CGNL1Q0VF96 1302 aa27.51■■□□□ 1.99
CCDC130-201ENST00000221554 REREQ9P2R6 1566 aa27.5■■□□□ 1.99
CCDC130-201ENST00000221554 APAF1O14727 1248 aa27.5■■□□□ 1.99
CCDC130-201ENST00000221554 NINLQ9Y2I6 1382 aa27.5■■□□□ 1.99
CCDC130-201ENST00000221554 NCBP3Q53F19 620 aaKnown RBP27.48■■□□□ 1.99
CCDC130-201ENST00000221554 TMEM132EQ6IEE7 984 aa27.48■■□□□ 1.99
CCDC130-201ENST00000221554 NOP58Q9Y2X3 529 aaKnown RBP27.48■■□□□ 1.99
CCDC130-201ENST00000221554 IPO9Q96P70 1041 aaKnown RBP27.48■■□□□ 1.99
CCDC130-201ENST00000221554 CCDC146Q8IYE0 955 aa27.47■■□□□ 1.99
CCDC130-201ENST00000221554 SLC12A5Q9H2X9 1139 aa27.47■■□□□ 1.99
CCDC130-201ENST00000221554 ARHGEF28Q8N1W1 1705 aaKnown RBP27.46■■□□□ 1.99
CCDC130-201ENST00000221554 ANKRD36BQ8N2N9 1353 aa27.46■■□□□ 1.99
CCDC130-201ENST00000221554 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
CCDC130-201ENST00000221554 IDI1Q13907 227 aa27.45■■□□□ 1.98
CCDC130-201ENST00000221554 CENPQQ7L2Z9 268 aaPredicted RBP27.44■■□□□ 1.98
CCDC130-201ENST00000221554 PPP6R1Q9UPN7 881 aa27.44■■□□□ 1.98
CCDC130-201ENST00000221554 RUNDC1Q96C34 613 aa27.42■■□□□ 1.98
CCDC130-201ENST00000221554 PDE4AP27815 886 aa27.41■■□□□ 1.98
CCDC130-201ENST00000221554 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
CCDC130-201ENST00000221554 BACH2Q9BYV9 841 aa27.4■■□□□ 1.98
CCDC130-201ENST00000221554 AGLP35573 1532 aa27.4■■□□□ 1.98
CCDC130-201ENST00000221554 TULP4Q9NRJ4 1543 aa27.39■■□□□ 1.98
CCDC130-201ENST00000221554 SHPRHQ149N8 1683 aa27.38■■□□□ 1.97
CCDC130-201ENST00000221554 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
CCDC130-201ENST00000221554 KDM2BQ8NHM5 1336 aa27.38■■□□□ 1.97
CCDC130-201ENST00000221554 C20orf194Q5TEA3 1177 aa27.37■■□□□ 1.97
CCDC130-201ENST00000221554 WWC1Q8IX03 1113 aa27.36■■□□□ 1.97
CCDC130-201ENST00000221554 ZBTB47Q9UFB7 747 aaPredicted RBP27.36■■□□□ 1.97
CCDC130-201ENST00000221554 CCDC27Q2M243 656 aa27.35■■□□□ 1.97
CCDC130-201ENST00000221554 WDR63Q8IWG1 891 aa27.35■■□□□ 1.97
CCDC130-201ENST00000221554 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
CCDC130-201ENST00000221554 MLECQ14165 292 aa27.34■■□□□ 1.97
CCDC130-201ENST00000221554 PDE3AQ14432 1141 aa27.34■■□□□ 1.97
CCDC130-201ENST00000221554 MTHFSP49914 203 aa27.32■■□□□ 1.96
CCDC130-201ENST00000221554 AAMPQ13685 434 aa27.31■■□□□ 1.96
CCDC130-201ENST00000221554 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
CCDC130-201ENST00000221554 SPINK5Q9NQ38 1064 aaPredicted RBP27.31■■□□□ 1.96
CCDC130-201ENST00000221554 ADAMTSL3P82987 1691 aa27.31■■□□□ 1.96
CCDC130-201ENST00000221554 FER1L4A9Z1Z3 1794 aa27.31■■□□□ 1.96
CCDC130-201ENST00000221554 IQSEC2Q5JU85 1478 aa27.3■■□□□ 1.96
CCDC130-201ENST00000221554 ABCC11Q96J66 1382 aa27.29■■□□□ 1.96
CCDC130-201ENST00000221554 NUTM2DQ5VT03 806 aaPredicted RBP27.28■■□□□ 1.96
CCDC130-201ENST00000221554 TERF2IPQ9NYB0 399 aa27.28■■□□□ 1.96
CCDC130-201ENST00000221554 MED14O60244 1454 aa27.27■■□□□ 1.96
CCDC130-201ENST00000221554 PTPRMP28827 1452 aa27.27■■□□□ 1.96
CCDC130-201ENST00000221554 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
CCDC130-201ENST00000221554 TCP11L2Q8N4U5 519 aa27.27■■□□□ 1.96
CCDC130-201ENST00000221554 YTHDC2Q9H6S0 1430 aaKnown RBP27.26■■□□□ 1.95
CCDC130-201ENST00000221554 CABP2Q9NPB3 220 aa27.26■■□□□ 1.95
CCDC130-201ENST00000221554 MYO5BQ9ULV0 1848 aa27.25■■□□□ 1.95
CCDC130-201ENST00000221554 TNNT2P45379 298 aaPredicted RBP27.25■■□□□ 1.95
CCDC130-201ENST00000221554 SRPK2P78362 688 aaKnown RBP27.25■■□□□ 1.95
CCDC130-201ENST00000221554 POGKQ9P215 609 aa27.23■■□□□ 1.95
CCDC130-201ENST00000221554 BCAR3O75815 825 aa27.22■■□□□ 1.95
CCDC130-201ENST00000221554 RIMS1Q86UR5 1692 aaKnown RBP27.22■■□□□ 1.95
CCDC130-201ENST00000221554 DDRGK1Q96HY6 314 aa27.21■■□□□ 1.95
CCDC130-201ENST00000221554 MYH16Q9H6N6 1097 aa27.21■■□□□ 1.95
CCDC130-201ENST00000221554 STK26Q9P289 416 aa27.21■■□□□ 1.95
CCDC130-201ENST00000221554 A0A1W2PP64 1363 aa27.21■■□□□ 1.95
CCDC130-201ENST00000221554 ALKQ9UM73 1620 aa27.2■■□□□ 1.95
CCDC130-201ENST00000221554 KDM4FA0A1W2PPD8 638 aa27.2■■□□□ 1.94
CCDC130-201ENST00000221554 PAK3O75914 559 aaPredicted RBP27.2■■□□□ 1.94
CCDC130-201ENST00000221554 STAG3Q9UJ98 1225 aa27.2■■□□□ 1.94
CCDC130-201ENST00000221554 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
CCDC130-201ENST00000221554 ANKRD26Q9UPS8 1709 aa27.18■■□□□ 1.94
CCDC130-201ENST00000221554 CT47B1P0C2W7 299 aaPredicted RBP27.18■■□□□ 1.94
CCDC130-201ENST00000221554 HDGFL2Q7Z4V5 671 aaPredicted RBP27.18■■□□□ 1.94
CCDC130-201ENST00000221554 PRAM1Q96QH2 718 aa27.18■■□□□ 1.94
CCDC130-201ENST00000221554 PNNQ9H307 717 aaKnown RBP27.18■■□□□ 1.94
CCDC130-201ENST00000221554 DLC1Q96QB1 1528 aa27.18■■□□□ 1.94
CCDC130-201ENST00000221554 CANXP27824 592 aaKnown RBP27.17■■□□□ 1.94
CCDC130-201ENST00000221554 ADGRB2O60241 1585 aa27.16■■□□□ 1.94
CCDC130-201ENST00000221554 U2AF1L5P0DN76 240 aaPredicted RBP27.16■■□□□ 1.94
CCDC130-201ENST00000221554 U2AF1Q01081 240 aaKnown RBP eCLIP27.16■■□□□ 1.94
CCDC130-201ENST00000221554 FAM161AQ3B820 660 aa27.15■■□□□ 1.94
CCDC130-201ENST00000221554 SAFB2Q14151 953 aaKnown RBP eCLIP27.14■■□□□ 1.94
CCDC130-201ENST00000221554 SPATA31D1Q6ZQQ2 1576 aa27.14■■□□□ 1.94
CCDC130-201ENST00000221554 RARSP54136 660 aaKnown RBP27.14■■□□□ 1.93
CCDC130-201ENST00000221554 FBXO31Q5XUX0 539 aaPredicted RBP27.14■■□□□ 1.93
CCDC130-201ENST00000221554 NEUROD2Q15784 382 aa27.13■■□□□ 1.93
CCDC130-201ENST00000221554 NPM2Q86SE8 214 aaKnown RBP27.13■■□□□ 1.93
CCDC130-201ENST00000221554 C3P01024 1663 aa27.13■■□□□ 1.93
CCDC130-201ENST00000221554 MINK1Q8N4C8 1332 aaPredicted RBP27.12■■□□□ 1.93
CCDC130-201ENST00000221554 CLUAP1Q96AJ1 413 aa27.11■■□□□ 1.93
CCDC130-201ENST00000221554 FYB1O15117 783 aa27.1■■□□□ 1.93
CCDC130-201ENST00000221554 RRP7AQ9Y3A4 280 aaKnown RBP27.1■■□□□ 1.93
CCDC130-201ENST00000221554 A2ML1A8K2U0 1454 aa27.1■■□□□ 1.93
CCDC130-201ENST00000221554 CD163L1Q9NR16 1453 aa27.1■■□□□ 1.93
CCDC130-201ENST00000221554 CDK19Q9BWU1 502 aa27.09■■□□□ 1.93
CCDC130-201ENST00000221554 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.08■■□□□ 1.93
CCDC130-201ENST00000221554 PMFBP1Q8TBY8 1022 aa27.08■■□□□ 1.93
CCDC130-201ENST00000221554 IL16Q14005 1332 aa27.07■■□□□ 1.92
CCDC130-201ENST00000221554 COL3A1P02461 1466 aaPredicted RBP27.07■■□□□ 1.92
CCDC130-201ENST00000221554 NLRP1Q9C000 1473 aa27.07■■□□□ 1.92
CCDC130-201ENST00000221554 MAPK8IP3Q9UPT6 1336 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms