RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 NUTM2GQ5VZR2 741 aa21.62■■□□□ 1.05
EXTL3-201ENST00000220562 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
EXTL3-201ENST00000220562 FYB1O15117 783 aa21.61■■□□□ 1.05
EXTL3-201ENST00000220562 CDC45O75419 566 aa21.61■■□□□ 1.05
EXTL3-201ENST00000220562 WASHC4Q2M389 1173 aa21.61■■□□□ 1.05
EXTL3-201ENST00000220562 RAPGEF4Q8WZA2 1011 aa21.6■■□□□ 1.05
EXTL3-201ENST00000220562 UBTFL1P0CB47 393 aaPredicted RBP21.6■■□□□ 1.05
EXTL3-201ENST00000220562 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
EXTL3-201ENST00000220562 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
EXTL3-201ENST00000220562 CCDC73Q6ZRK6 1079 aa21.6■■□□□ 1.05
EXTL3-201ENST00000220562 SAFBQ15424 915 aaKnown RBP eCLIP21.59■■□□□ 1.05
EXTL3-201ENST00000220562 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
EXTL3-201ENST00000220562 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.05
EXTL3-201ENST00000220562 RALYLQ86SE5 291 aaKnown RBP21.58■■□□□ 1.04
EXTL3-201ENST00000220562 CCDC27Q2M243 656 aa21.58■■□□□ 1.04
EXTL3-201ENST00000220562 KDM4AO75164 1064 aa21.57■■□□□ 1.04
EXTL3-201ENST00000220562 RBM33Q96EV2 1170 aaKnown RBP21.57■■□□□ 1.04
EXTL3-201ENST00000220562 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
EXTL3-201ENST00000220562 TMEM132EQ6IEE7 984 aa21.56■■□□□ 1.04
EXTL3-201ENST00000220562 SAMD1Q6SPF0 538 aaPredicted RBP21.56■■□□□ 1.04
EXTL3-201ENST00000220562 ADAMTS8Q9UP79 889 aa21.56■■□□□ 1.04
EXTL3-201ENST00000220562 NAP1L1P55209 391 aaKnown RBP21.56■■□□□ 1.04
EXTL3-201ENST00000220562 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.56■■□□□ 1.04
EXTL3-201ENST00000220562 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
EXTL3-201ENST00000220562 CCDC43Q96MW1 224 aaKnown RBP21.55■■□□□ 1.04
EXTL3-201ENST00000220562 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
EXTL3-201ENST00000220562 TEX35Q5T0J7 233 aa21.55■■□□□ 1.04
EXTL3-201ENST00000220562 VSIG10Q8N0Z9 540 aa21.54■■□□□ 1.04
EXTL3-201ENST00000220562 NLRP2Q9NX02 1062 aa21.54■■□□□ 1.04
EXTL3-201ENST00000220562 AAMPQ13685 434 aa21.54■■□□□ 1.04
EXTL3-201ENST00000220562 BCL11BQ9C0K0 894 aaPredicted RBP21.54■■□□□ 1.04
EXTL3-201ENST00000220562 ATF3P18847 181 aa21.53■■□□□ 1.04
EXTL3-201ENST00000220562 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.53■■□□□ 1.04
EXTL3-201ENST00000220562 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
EXTL3-201ENST00000220562 PSMA5P28066 241 aa21.52■■□□□ 1.04
EXTL3-201ENST00000220562 NFKBIBQ15653 356 aa21.52■■□□□ 1.04
EXTL3-201ENST00000220562 FSD1Q9BTV5 496 aa21.52■■□□□ 1.04
EXTL3-201ENST00000220562 OLFM4Q6UX06 510 aa21.52■■□□□ 1.04
EXTL3-201ENST00000220562 MTHFSP49914 203 aa21.52■■□□□ 1.03
EXTL3-201ENST00000220562 FAM43AQ8N2R8 423 aa21.52■■□□□ 1.03
EXTL3-201ENST00000220562 BRMS1Q9HCU9 246 aa21.52■■□□□ 1.03
EXTL3-201ENST00000220562 LRRC9Q6ZRR7 1453 aa21.51■■□□□ 1.03
EXTL3-201ENST00000220562 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
EXTL3-201ENST00000220562 MTMR7Q9Y216 660 aa21.51■■□□□ 1.03
EXTL3-201ENST00000220562 FAM69CQ0P6D2 419 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 KIF21BO75037 1637 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 IGF1RP08069 1367 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 ARHGAP5Q13017 1502 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 PDILTQ8N807 584 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 MNS1Q8NEH6 495 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 FBXO3Q9UK99 471 aa21.5■■□□□ 1.03
EXTL3-201ENST00000220562 DNAJC2Q99543 621 aaKnown RBP21.49■■□□□ 1.03
EXTL3-201ENST00000220562 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
EXTL3-201ENST00000220562 NAT10Q9H0A0 1025 aaKnown RBP21.49■■□□□ 1.03
EXTL3-201ENST00000220562 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
EXTL3-201ENST00000220562 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
EXTL3-201ENST00000220562 CDCA7LQ96GN5 454 aa21.49■■□□□ 1.03
EXTL3-201ENST00000220562 RUFY1Q96T51 708 aa21.49■■□□□ 1.03
EXTL3-201ENST00000220562 NLRP6P59044 892 aa21.48■■□□□ 1.03
EXTL3-201ENST00000220562 CCDC39Q9UFE4 941 aa21.48■■□□□ 1.03
EXTL3-201ENST00000220562 CWC22Q9HCG8 908 aaKnown RBP21.48■■□□□ 1.03
EXTL3-201ENST00000220562 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
EXTL3-201ENST00000220562 NCOA2Q15596 1464 aa21.47■■□□□ 1.03
EXTL3-201ENST00000220562 NASPP49321 788 aaPredicted RBP21.47■■□□□ 1.03
EXTL3-201ENST00000220562 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
EXTL3-201ENST00000220562 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
EXTL3-201ENST00000220562 AK7Q96M32 723 aa21.47■■□□□ 1.03
EXTL3-201ENST00000220562 PPP2R1AP30153 589 aa21.46■■□□□ 1.03
EXTL3-201ENST00000220562 XBP1P17861 261 aa21.46■■□□□ 1.03
EXTL3-201ENST00000220562 SURF6O75683 361 aaKnown RBP21.46■■□□□ 1.03
EXTL3-201ENST00000220562 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
EXTL3-201ENST00000220562 EPS15P42566 896 aa21.46■■□□□ 1.03
EXTL3-201ENST00000220562 RNF214Q8ND24 703 aa21.46■■□□□ 1.03
EXTL3-201ENST00000220562 ARGLU1Q9NWB6 273 aaPredicted RBP21.46■■□□□ 1.03
EXTL3-201ENST00000220562 CT47A1Q5JQC4 288 aaPredicted RBP21.45■■□□□ 1.02
EXTL3-201ENST00000220562 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.02
EXTL3-201ENST00000220562 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
EXTL3-201ENST00000220562 GNAI3P08754 354 aa21.44■■□□□ 1.02
EXTL3-201ENST00000220562 KLHL34Q8N239 644 aa21.44■■□□□ 1.02
EXTL3-201ENST00000220562 CLASRPQ8N2M8 674 aaKnown RBP21.44■■□□□ 1.02
EXTL3-201ENST00000220562 SDF4Q9BRK5 362 aa21.44■■□□□ 1.02
EXTL3-201ENST00000220562 FAM177BA6PVY3 158 aa21.44■■□□□ 1.02
EXTL3-201ENST00000220562 PRKAR2BP31323 418 aa21.44■■□□□ 1.02
EXTL3-201ENST00000220562 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
EXTL3-201ENST00000220562 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
EXTL3-201ENST00000220562 MRE11P49959 708 aa21.43■■□□□ 1.02
EXTL3-201ENST00000220562 CAVIN1Q6NZI2 390 aaKnown RBP21.43■■□□□ 1.02
EXTL3-201ENST00000220562 ABTB2Q8N961 1025 aa21.43■■□□□ 1.02
EXTL3-201ENST00000220562 R3HCC1Q9Y3T6 440 aaKnown RBP21.43■■□□□ 1.02
EXTL3-201ENST00000220562 TBC1D2BQ9UPU7 963 aa21.42■■□□□ 1.02
EXTL3-201ENST00000220562 LETM1O95202 739 aaPredicted RBP21.42■■□□□ 1.02
EXTL3-201ENST00000220562 KIF6Q6ZMV9 814 aa21.42■■□□□ 1.02
EXTL3-201ENST00000220562 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
EXTL3-201ENST00000220562 TRAK2O60296 914 aa21.41■■□□□ 1.02
EXTL3-201ENST00000220562 TWISTNBQ3B726 338 aaPredicted RBP21.41■■□□□ 1.02
EXTL3-201ENST00000220562 TTLL5Q6EMB2 1281 aa21.41■■□□□ 1.02
EXTL3-201ENST00000220562 ACBD3Q9H3P7 528 aa21.41■■□□□ 1.02
EXTL3-201ENST00000220562 ODF2Q5BJF6 829 aa21.4■■□□□ 1.02
EXTL3-201ENST00000220562 CAGE1Q8TC20 777 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms