RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
VPS18-201ENST00000220509 SMG6Q86US8 1419 aaKnown RBP13.36□□□□□ -0.27
VPS18-201ENST00000220509 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
VPS18-201ENST00000220509 APPP05067 770 aa13.35□□□□□ -0.27
VPS18-201ENST00000220509 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
VPS18-201ENST00000220509 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
VPS18-201ENST00000220509 UHRF1BP1LA0JNW5 1464 aa13.35□□□□□ -0.27
VPS18-201ENST00000220509 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
VPS18-201ENST00000220509 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
VPS18-201ENST00000220509 HDGFP51858 240 aaKnown RBP13.34□□□□□ -0.27
VPS18-201ENST00000220509 A2MP01023 1474 aa13.34□□□□□ -0.27
VPS18-201ENST00000220509 ZNF518AQ6AHZ1 1483 aa13.34□□□□□ -0.27
VPS18-201ENST00000220509 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
VPS18-201ENST00000220509 ARID3AQ99856 593 aa13.34□□□□□ -0.27
VPS18-201ENST00000220509 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.28
VPS18-201ENST00000220509 EVC2Q86UK5 1308 aa13.33□□□□□ -0.28
VPS18-201ENST00000220509 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
VPS18-201ENST00000220509 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
VPS18-201ENST00000220509 MS4A1P11836 297 aa13.32□□□□□ -0.28
VPS18-201ENST00000220509 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
VPS18-201ENST00000220509 ZNF830Q96NB3 372 aaPredicted RBP13.32□□□□□ -0.28
VPS18-201ENST00000220509 ANP32BQ92688 251 aaKnown RBP13.32□□□□□ -0.28
VPS18-201ENST00000220509 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
VPS18-201ENST00000220509 E9PSI1 815 aa13.31□□□□□ -0.28
VPS18-201ENST00000220509 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
VPS18-201ENST00000220509 ARHGEF5Q12774 1597 aa13.31□□□□□ -0.28
VPS18-201ENST00000220509 ATP7AQ04656 1500 aa13.31□□□□□ -0.28
VPS18-201ENST00000220509 NOS1P29475 1434 aa13.3□□□□□ -0.28
VPS18-201ENST00000220509 PRAM1Q96QH2 718 aa13.3□□□□□ -0.28
VPS18-201ENST00000220509 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
VPS18-201ENST00000220509 BECN1Q14457 450 aa13.3□□□□□ -0.28
VPS18-201ENST00000220509 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
VPS18-201ENST00000220509 GGNBP2Q9H3C7 697 aa13.29□□□□□ -0.28
VPS18-201ENST00000220509 SMC4Q9NTJ3 1288 aa13.29□□□□□ -0.28
VPS18-201ENST00000220509 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
VPS18-201ENST00000220509 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
VPS18-201ENST00000220509 KCNA4P22459 653 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 SLC52A1Q9NWF4 448 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 YEATS2Q9ULM3 1422 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 TESK2Q96S53 571 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 ABCC1P33527 1531 aa13.28□□□□□ -0.28
VPS18-201ENST00000220509 DNTTIP2Q5QJE6 756 aaKnown RBP13.27□□□□□ -0.28
VPS18-201ENST00000220509 COG6Q9Y2V7 657 aa13.27□□□□□ -0.28
VPS18-201ENST00000220509 PLA2R1Q13018 1463 aa13.27□□□□□ -0.28
VPS18-201ENST00000220509 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
VPS18-201ENST00000220509 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
VPS18-201ENST00000220509 MTHFSP49914 203 aa13.26□□□□□ -0.29
VPS18-201ENST00000220509 KCNG1Q9UIX4 513 aa13.26□□□□□ -0.29
VPS18-201ENST00000220509 FAM193AP78312 1265 aa13.26□□□□□ -0.29
VPS18-201ENST00000220509 TRIM44Q96DX7 344 aaPredicted RBP13.26□□□□□ -0.29
VPS18-201ENST00000220509 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
VPS18-201ENST00000220509 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
VPS18-201ENST00000220509 PDCL3Q9H2J4 239 aa13.24□□□□□ -0.29
VPS18-201ENST00000220509 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
VPS18-201ENST00000220509 RALGAPBQ86X10 1494 aa13.24□□□□□ -0.29
VPS18-201ENST00000220509 APBB1O00213 710 aa13.23□□□□□ -0.29
VPS18-201ENST00000220509 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
VPS18-201ENST00000220509 L1TD1Q5T7N2 865 aaKnown RBP13.22□□□□□ -0.29
VPS18-201ENST00000220509 TMED8Q6PL24 325 aaPredicted RBP13.22□□□□□ -0.29
VPS18-201ENST00000220509 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
VPS18-201ENST00000220509 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
VPS18-201ENST00000220509 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
VPS18-201ENST00000220509 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
VPS18-201ENST00000220509 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.29
VPS18-201ENST00000220509 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.29
VPS18-201ENST00000220509 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
VPS18-201ENST00000220509 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.3
VPS18-201ENST00000220509 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
VPS18-201ENST00000220509 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
VPS18-201ENST00000220509 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
VPS18-201ENST00000220509 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
VPS18-201ENST00000220509 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
VPS18-201ENST00000220509 C14orf93Q9H972 538 aaKnown RBP13.2□□□□□ -0.3
VPS18-201ENST00000220509 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
VPS18-201ENST00000220509 IGSF3O75054 1194 aa13.2□□□□□ -0.3
VPS18-201ENST00000220509 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
VPS18-201ENST00000220509 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
VPS18-201ENST00000220509 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
VPS18-201ENST00000220509 ATP10AO60312 1499 aa13.19□□□□□ -0.3
VPS18-201ENST00000220509 NPATQ14207 1427 aa13.19□□□□□ -0.3
VPS18-201ENST00000220509 A0A0G2JS52 829 aa13.19□□□□□ -0.3
VPS18-201ENST00000220509 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
VPS18-201ENST00000220509 FBLN1P23142 703 aa13.18□□□□□ -0.3
VPS18-201ENST00000220509 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
VPS18-201ENST00000220509 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
VPS18-201ENST00000220509 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
VPS18-201ENST00000220509 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
VPS18-201ENST00000220509 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
VPS18-201ENST00000220509 HMOX1P09601 288 aa13.18□□□□□ -0.3
VPS18-201ENST00000220509 RIPK4P57078 832 aa13.17□□□□□ -0.3
VPS18-201ENST00000220509 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
VPS18-201ENST00000220509 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
VPS18-201ENST00000220509 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
VPS18-201ENST00000220509 COG3Q96JB2 828 aa13.17□□□□□ -0.3
VPS18-201ENST00000220509 RPGRIP1LQ68CZ1 1315 aa13.16□□□□□ -0.3
VPS18-201ENST00000220509 BCAR3O75815 825 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms