RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
KNOP1-201ENST00000219837 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
KNOP1-201ENST00000219837 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
KNOP1-201ENST00000219837 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
KNOP1-201ENST00000219837 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
KNOP1-201ENST00000219837 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
KNOP1-201ENST00000219837 SMC3Q9UQE7 1217 aa13.44□□□□□ -0.26
KNOP1-201ENST00000219837 SASS6Q6UVJ0 657 aa13.44□□□□□ -0.26
KNOP1-201ENST00000219837 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
KNOP1-201ENST00000219837 PDE4AP27815 886 aa13.44□□□□□ -0.26
KNOP1-201ENST00000219837 HOMER1Q86YM7 354 aa13.44□□□□□ -0.26
KNOP1-201ENST00000219837 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
KNOP1-201ENST00000219837 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
KNOP1-201ENST00000219837 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
KNOP1-201ENST00000219837 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
KNOP1-201ENST00000219837 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
KNOP1-201ENST00000219837 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
KNOP1-201ENST00000219837 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
KNOP1-201ENST00000219837 WWC2Q6AWC2 1192 aa13.42□□□□□ -0.26
KNOP1-201ENST00000219837 CUX1P39880 1505 aa13.42□□□□□ -0.26
KNOP1-201ENST00000219837 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
KNOP1-201ENST00000219837 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 DNAJC2Q99543 621 aaKnown RBP13.41□□□□□ -0.26
KNOP1-201ENST00000219837 STRN4Q9NRL3 753 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 GNAI1P63096 354 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 WASHC2AQ641Q2 1341 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 TTC39AQ5SRH9 613 aa13.41□□□□□ -0.26
KNOP1-201ENST00000219837 OLFM4Q6UX06 510 aa13.4□□□□□ -0.26
KNOP1-201ENST00000219837 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
KNOP1-201ENST00000219837 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
KNOP1-201ENST00000219837 NUTM2BA6NNL0 878 aaPredicted RBP13.39□□□□□ -0.27
KNOP1-201ENST00000219837 NUTM2EB1AL46 878 aaPredicted RBP13.39□□□□□ -0.27
KNOP1-201ENST00000219837 XBP1P17861 261 aa13.39□□□□□ -0.27
KNOP1-201ENST00000219837 NUTM2AQ8IVF1 878 aaPredicted RBP13.39□□□□□ -0.27
KNOP1-201ENST00000219837 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
KNOP1-201ENST00000219837 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
KNOP1-201ENST00000219837 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
KNOP1-201ENST00000219837 RUFY1Q96T51 708 aa13.39□□□□□ -0.27
KNOP1-201ENST00000219837 PDILTQ8N807 584 aa13.39□□□□□ -0.27
KNOP1-201ENST00000219837 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
KNOP1-201ENST00000219837 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
KNOP1-201ENST00000219837 AK7Q96M32 723 aa13.38□□□□□ -0.27
KNOP1-201ENST00000219837 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
KNOP1-201ENST00000219837 TBC1D2BQ9UPU7 963 aa13.38□□□□□ -0.27
KNOP1-201ENST00000219837 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
KNOP1-201ENST00000219837 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
KNOP1-201ENST00000219837 CCDC73Q6ZRK6 1079 aa13.37□□□□□ -0.27
KNOP1-201ENST00000219837 GAPVD1Q14C86 1478 aa13.37□□□□□ -0.27
KNOP1-201ENST00000219837 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
KNOP1-201ENST00000219837 CDK5RAP3Q96JB5 506 aa13.37□□□□□ -0.27
KNOP1-201ENST00000219837 RRP12Q5JTH9 1297 aaKnown RBP13.36□□□□□ -0.27
KNOP1-201ENST00000219837 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
KNOP1-201ENST00000219837 NLRP6P59044 892 aa13.36□□□□□ -0.27
KNOP1-201ENST00000219837 CNNM1Q9NRU3 951 aa13.36□□□□□ -0.27
KNOP1-201ENST00000219837 PSMA5P28066 241 aa13.36□□□□□ -0.27
KNOP1-201ENST00000219837 CAGE1Q8TC20 777 aa13.36□□□□□ -0.27
KNOP1-201ENST00000219837 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
KNOP1-201ENST00000219837 ZNF428Q96B54 188 aa13.35□□□□□ -0.27
KNOP1-201ENST00000219837 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
KNOP1-201ENST00000219837 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
KNOP1-201ENST00000219837 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
KNOP1-201ENST00000219837 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
KNOP1-201ENST00000219837 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
KNOP1-201ENST00000219837 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
KNOP1-201ENST00000219837 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
KNOP1-201ENST00000219837 HSP90AA2PQ14568 343 aaPredicted RBP13.34□□□□□ -0.27
KNOP1-201ENST00000219837 GSE1Q14687 1217 aa13.34□□□□□ -0.27
KNOP1-201ENST00000219837 RBM5P52756 815 aaKnown RBP eCLIP13.33□□□□□ -0.27
KNOP1-201ENST00000219837 SKIDA1Q1XH10 827 aa13.33□□□□□ -0.27
KNOP1-201ENST00000219837 PLEKHO1Q53GL0 409 aaPredicted RBP13.33□□□□□ -0.27
KNOP1-201ENST00000219837 MYOM3Q5VTT5 1437 aa13.33□□□□□ -0.28
KNOP1-201ENST00000219837 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
KNOP1-201ENST00000219837 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
KNOP1-201ENST00000219837 PANK1Q8TE04 598 aa13.33□□□□□ -0.28
KNOP1-201ENST00000219837 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
KNOP1-201ENST00000219837 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
KNOP1-201ENST00000219837 CDC45O75419 566 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 CABP4P57796 275 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 RAD54L2Q9Y4B4 1467 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 OFD1O75665 1012 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 KRT18P05783 430 aaKnown RBP13.32□□□□□ -0.28
KNOP1-201ENST00000219837 MAGEC2Q9UBF1 373 aaPredicted RBP13.32□□□□□ -0.28
KNOP1-201ENST00000219837 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
KNOP1-201ENST00000219837 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
KNOP1-201ENST00000219837 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
KNOP1-201ENST00000219837 CDR1P51861 262 aa13.31□□□□□ -0.28
KNOP1-201ENST00000219837 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
KNOP1-201ENST00000219837 CCDC158Q5M9N0 1113 aa13.31□□□□□ -0.28
KNOP1-201ENST00000219837 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
KNOP1-201ENST00000219837 RRBP1Q9P2E9 1410 aaKnown RBP13.31□□□□□ -0.28
KNOP1-201ENST00000219837 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
KNOP1-201ENST00000219837 PAF1Q8N7H5 531 aa13.3□□□□□ -0.28
KNOP1-201ENST00000219837 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
KNOP1-201ENST00000219837 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
KNOP1-201ENST00000219837 CHMP5Q9NZZ3 219 aa13.3□□□□□ -0.28
KNOP1-201ENST00000219837 C22orf23Q9BZE7 217 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms