RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 COG3Q96JB2 828 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 CDK19Q9BWU1 502 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 WDR63Q8IWG1 891 aa12.28□□□□□ -0.44
CSTF1-201ENST00000217109 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
CSTF1-201ENST00000217109 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.44
CSTF1-201ENST00000217109 FBLN1P23142 703 aa12.27□□□□□ -0.44
CSTF1-201ENST00000217109 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.44
CSTF1-201ENST00000217109 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
CSTF1-201ENST00000217109 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.45
CSTF1-201ENST00000217109 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
CSTF1-201ENST00000217109 PLA2R1Q13018 1463 aa12.27□□□□□ -0.45
CSTF1-201ENST00000217109 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.45
CSTF1-201ENST00000217109 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
CSTF1-201ENST00000217109 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
CSTF1-201ENST00000217109 WAPLQ7Z5K2 1190 aa12.26□□□□□ -0.45
CSTF1-201ENST00000217109 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
CSTF1-201ENST00000217109 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
CSTF1-201ENST00000217109 GOLGA6L22H0YM25 854 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
CSTF1-201ENST00000217109 TXNDC2Q86VQ3 553 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 RPGRIP1LQ68CZ1 1315 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.45
CSTF1-201ENST00000217109 ABCC2Q92887 1545 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
CSTF1-201ENST00000217109 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
CSTF1-201ENST00000217109 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
CSTF1-201ENST00000217109 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
CSTF1-201ENST00000217109 NGDNQ8NEJ9 315 aaKnown RBP12.23□□□□□ -0.45
CSTF1-201ENST00000217109 C22orf23Q9BZE7 217 aa12.23□□□□□ -0.45
CSTF1-201ENST00000217109 ATF7IPQ6VMQ6 1270 aa12.23□□□□□ -0.45
CSTF1-201ENST00000217109 SSH1Q8WYL5 1049 aa12.23□□□□□ -0.45
CSTF1-201ENST00000217109 ASXL2Q76L83 1435 aa12.23□□□□□ -0.45
CSTF1-201ENST00000217109 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
CSTF1-201ENST00000217109 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
CSTF1-201ENST00000217109 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
CSTF1-201ENST00000217109 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
CSTF1-201ENST00000217109 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.22□□□□□ -0.45
CSTF1-201ENST00000217109 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
CSTF1-201ENST00000217109 CDC42BPAQ5VT25 1732 aa12.22□□□□□ -0.45
CSTF1-201ENST00000217109 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
CSTF1-201ENST00000217109 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
CSTF1-201ENST00000217109 RLBP1P12271 317 aa12.21□□□□□ -0.45
CSTF1-201ENST00000217109 AMPHP49418 695 aa12.21□□□□□ -0.45
CSTF1-201ENST00000217109 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.46
CSTF1-201ENST00000217109 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
CSTF1-201ENST00000217109 TTC37Q6PGP7 1564 aa12.2□□□□□ -0.46
CSTF1-201ENST00000217109 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
CSTF1-201ENST00000217109 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
CSTF1-201ENST00000217109 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
CSTF1-201ENST00000217109 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
CSTF1-201ENST00000217109 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
CSTF1-201ENST00000217109 AAMPQ13685 434 aa12.2□□□□□ -0.46
CSTF1-201ENST00000217109 GNAI1P63096 354 aa12.19□□□□□ -0.46
CSTF1-201ENST00000217109 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
CSTF1-201ENST00000217109 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
CSTF1-201ENST00000217109 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
CSTF1-201ENST00000217109 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
CSTF1-201ENST00000217109 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
CSTF1-201ENST00000217109 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
CSTF1-201ENST00000217109 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
CSTF1-201ENST00000217109 TRIM27P14373 513 aa12.18□□□□□ -0.46
CSTF1-201ENST00000217109 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
CSTF1-201ENST00000217109 STK31Q9BXU1 1019 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 FYB1O15117 783 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
CSTF1-201ENST00000217109 ATAD2Q6PL18 1390 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 GOLGA6L3A6NEY3 463 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 EID1Q9Y6B2 187 aa12.17□□□□□ -0.46
CSTF1-201ENST00000217109 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
CSTF1-201ENST00000217109 SEC24BO95487 1268 aa12.16□□□□□ -0.46
CSTF1-201ENST00000217109 OS9Q13438 667 aaPredicted RBP12.16□□□□□ -0.46
CSTF1-201ENST00000217109 NME9Q86XW9 330 aa12.16□□□□□ -0.46
CSTF1-201ENST00000217109 POLR3AO14802 1390 aaPredicted RBP12.16□□□□□ -0.46
CSTF1-201ENST00000217109 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
CSTF1-201ENST00000217109 SULT6B1Q6IMI4 303 aa12.16□□□□□ -0.46
CSTF1-201ENST00000217109 ATP10AO60312 1499 aa12.16□□□□□ -0.46
CSTF1-201ENST00000217109 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
CSTF1-201ENST00000217109 FCHSD2O94868 740 aa12.15□□□□□ -0.46
CSTF1-201ENST00000217109 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
CSTF1-201ENST00000217109 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
CSTF1-201ENST00000217109 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
CSTF1-201ENST00000217109 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
CSTF1-201ENST00000217109 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
CSTF1-201ENST00000217109 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
CSTF1-201ENST00000217109 CHMP5Q9NZZ3 219 aa12.14□□□□□ -0.47
CSTF1-201ENST00000217109 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
CSTF1-201ENST00000217109 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
CSTF1-201ENST00000217109 FOXD4L5Q5VV16 416 aaPredicted RBP12.14□□□□□ -0.47
CSTF1-201ENST00000217109 FOXD4L4Q8WXT5 416 aaPredicted RBP12.14□□□□□ -0.47
CSTF1-201ENST00000217109 SLC26A8Q96RN1 970 aa12.14□□□□□ -0.47
CSTF1-201ENST00000217109 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
CSTF1-201ENST00000217109 PREX2Q70Z35 1606 aa12.13□□□□□ -0.47
CSTF1-201ENST00000217109 HMMRO75330 724 aa12.13□□□□□ -0.47
CSTF1-201ENST00000217109 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms