RNA–Protein interactions for RNA: ENST00000215838.7

TCN2-201, Transcript of transcobalamin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCN2, Length 2,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-201ENST00000215838 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
TCN2-201ENST00000215838 TNPO1Q92973 898 aaKnown RBP14.26□□□□□ -0.13
TCN2-201ENST00000215838 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
TCN2-201ENST00000215838 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
TCN2-201ENST00000215838 STAC3Q96MF2 364 aa14.25□□□□□ -0.13
TCN2-201ENST00000215838 HECW2Q9P2P5 1572 aa14.25□□□□□ -0.13
TCN2-201ENST00000215838 ZSCAN20P17040 1043 aaPredicted RBP14.25□□□□□ -0.13
TCN2-201ENST00000215838 SLFN5Q08AF3 891 aa14.25□□□□□ -0.13
TCN2-201ENST00000215838 CLUAP1Q96AJ1 413 aa14.25□□□□□ -0.13
TCN2-201ENST00000215838 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
TCN2-201ENST00000215838 ZFYVE16Q7Z3T8 1539 aa14.24□□□□□ -0.13
TCN2-201ENST00000215838 PDIA4P13667 645 aaKnown RBP14.24□□□□□ -0.13
TCN2-201ENST00000215838 MFAP1P55081 439 aaKnown RBP14.24□□□□□ -0.13
TCN2-201ENST00000215838 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
TCN2-201ENST00000215838 INSRP06213 1382 aa14.24□□□□□ -0.13
TCN2-201ENST00000215838 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
TCN2-201ENST00000215838 C22orf23Q9BZE7 217 aa14.23□□□□□ -0.13
TCN2-201ENST00000215838 MAGI2Q86UL8 1455 aa14.23□□□□□ -0.13
TCN2-201ENST00000215838 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
TCN2-201ENST00000215838 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
TCN2-201ENST00000215838 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
TCN2-201ENST00000215838 UTP14CQ5TAP6 766 aaKnown RBP14.22□□□□□ -0.13
TCN2-201ENST00000215838 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
TCN2-201ENST00000215838 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
TCN2-201ENST00000215838 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
TCN2-201ENST00000215838 JARID2Q92833 1246 aaPredicted RBP14.21□□□□□ -0.13
TCN2-201ENST00000215838 UHRF1BP1Q6BDS2 1440 aa14.21□□□□□ -0.13
TCN2-201ENST00000215838 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
TCN2-201ENST00000215838 DDIT3P35638 169 aa14.21□□□□□ -0.13
TCN2-201ENST00000215838 PANK3Q9H999 370 aa14.21□□□□□ -0.13
TCN2-201ENST00000215838 HNRNPMP52272 730 aaKnown RBP eCLIP14.2□□□□□ -0.14
TCN2-201ENST00000215838 ANKRD30AQ9BXX3 1397 aa14.2□□□□□ -0.14
TCN2-201ENST00000215838 CANXP27824 592 aaKnown RBP14.2□□□□□ -0.14
TCN2-201ENST00000215838 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
TCN2-201ENST00000215838 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
TCN2-201ENST00000215838 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
TCN2-201ENST00000215838 CGNL1Q0VF96 1302 aa14.2□□□□□ -0.14
TCN2-201ENST00000215838 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
TCN2-201ENST00000215838 DYNC1I1O14576 645 aa14.19□□□□□ -0.14
TCN2-201ENST00000215838 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
TCN2-201ENST00000215838 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
TCN2-201ENST00000215838 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
TCN2-201ENST00000215838 CCDC94Q9BW85 323 aaPredicted RBP14.19□□□□□ -0.14
TCN2-201ENST00000215838 REREQ9P2R6 1566 aa14.19□□□□□ -0.14
TCN2-201ENST00000215838 TRMT2AQ8IZ69 625 aaKnown RBP14.18□□□□□ -0.14
TCN2-201ENST00000215838 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
TCN2-201ENST00000215838 ARHGEF40Q8TER5 1519 aa14.18□□□□□ -0.14
TCN2-201ENST00000215838 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
TCN2-201ENST00000215838 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
TCN2-201ENST00000215838 MTERF4Q7Z6M4 381 aaKnown RBP14.18□□□□□ -0.14
TCN2-201ENST00000215838 NUP155O75694 1391 aa14.18□□□□□ -0.14
TCN2-201ENST00000215838 ZBTB7CA1YPR0 619 aa14.17□□□□□ -0.14
TCN2-201ENST00000215838 ZNF500O60304 480 aaPredicted RBP14.17□□□□□ -0.14
TCN2-201ENST00000215838 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
TCN2-201ENST00000215838 NKTRP30414 1462 aaKnown RBP14.17□□□□□ -0.14
TCN2-201ENST00000215838 GBP4Q96PP9 640 aa14.17□□□□□ -0.14
TCN2-201ENST00000215838 TNNQ9UQP3 1299 aa14.17□□□□□ -0.14
TCN2-201ENST00000215838 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
TCN2-201ENST00000215838 COL17A1Q9UMD9 1497 aaPredicted RBP14.17□□□□□ -0.14
TCN2-201ENST00000215838 DUOX2Q9NRD8 1548 aa14.17□□□□□ -0.14
TCN2-201ENST00000215838 ABCA6Q8N139 1617 aa14.17□□□□□ -0.14
TCN2-201ENST00000215838 EIF2AK4Q9P2K8 1649 aaKnown RBP14.17□□□□□ -0.14
TCN2-201ENST00000215838 TSC1Q92574 1164 aa14.16□□□□□ -0.14
TCN2-201ENST00000215838 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
TCN2-201ENST00000215838 NCOA3Q9Y6Q9 1424 aa14.16□□□□□ -0.14
TCN2-201ENST00000215838 CBX1P83916 185 aa14.16□□□□□ -0.14
TCN2-201ENST00000215838 SKOR2Q2VWA4 1001 aaPredicted RBP14.16□□□□□ -0.14
TCN2-201ENST00000215838 RAB3GAP1Q15042 981 aa14.15□□□□□ -0.14
TCN2-201ENST00000215838 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
TCN2-201ENST00000215838 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
TCN2-201ENST00000215838 VGLL3A8MV65 326 aa14.14□□□□□ -0.15
TCN2-201ENST00000215838 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
TCN2-201ENST00000215838 TMEM51Q9NW97 253 aa14.14□□□□□ -0.15
TCN2-201ENST00000215838 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
TCN2-201ENST00000215838 APAF1O14727 1248 aa14.14□□□□□ -0.15
TCN2-201ENST00000215838 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
TCN2-201ENST00000215838 AFAP1Q8N556 730 aa14.13□□□□□ -0.15
TCN2-201ENST00000215838 RLBP1P12271 317 aa14.13□□□□□ -0.15
TCN2-201ENST00000215838 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
TCN2-201ENST00000215838 SASS6Q6UVJ0 657 aa14.13□□□□□ -0.15
TCN2-201ENST00000215838 SSFA2P28290 1259 aa14.12□□□□□ -0.15
TCN2-201ENST00000215838 PMFBP1Q8TBY8 1022 aa14.12□□□□□ -0.15
TCN2-201ENST00000215838 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
TCN2-201ENST00000215838 HSP90AB1P08238 724 aaKnown RBP14.11□□□□□ -0.15
TCN2-201ENST00000215838 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
TCN2-201ENST00000215838 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
TCN2-201ENST00000215838 ZKSCAN5Q9Y2L8 839 aa14.11□□□□□ -0.15
TCN2-201ENST00000215838 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
TCN2-201ENST00000215838 ZBTB22O15209 634 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 TNNT2P45379 298 aaPredicted RBP14.1□□□□□ -0.15
TCN2-201ENST00000215838 ATP2B3Q16720 1220 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 HS1BP3Q53T59 392 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 ZNF710Q8N1W2 664 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 AGLP35573 1532 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 ATP10AO60312 1499 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 A2MP01023 1474 aa14.1□□□□□ -0.15
TCN2-201ENST00000215838 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
TCN2-201ENST00000215838 UNC13BO14795 1591 aa14.09□□□□□ -0.15
TCN2-201ENST00000215838 FAM177BA6PVY3 158 aa14.09□□□□□ -0.15
TCN2-201ENST00000215838 IGSF3O75054 1194 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms