RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
GPATCH1-201ENST00000170564 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
GPATCH1-201ENST00000170564 METP08581 1390 aa15.12■□□□□ 0.01
GPATCH1-201ENST00000170564 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
GPATCH1-201ENST00000170564 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
GPATCH1-201ENST00000170564 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
GPATCH1-201ENST00000170564 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
GPATCH1-201ENST00000170564 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
GPATCH1-201ENST00000170564 TMEM2Q9UHN6 1383 aa15.09■□□□□ 0.01
GPATCH1-201ENST00000170564 NSD3Q9BZ95 1437 aa15.09■□□□□ 0.01
GPATCH1-201ENST00000170564 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
GPATCH1-201ENST00000170564 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
GPATCH1-201ENST00000170564 CD163L1Q9NR16 1453 aa15.09■□□□□ 0.01
GPATCH1-201ENST00000170564 NOP58Q9Y2X3 529 aaKnown RBP15.08■□□□□ 0.01
GPATCH1-201ENST00000170564 DLC1Q96QB1 1528 aa15.08■□□□□ 0
GPATCH1-201ENST00000170564 WAPLQ7Z5K2 1190 aa15.08■□□□□ 0
GPATCH1-201ENST00000170564 EVC2Q86UK5 1308 aa15.08■□□□□ 0
GPATCH1-201ENST00000170564 MINK1Q8N4C8 1332 aaPredicted RBP15.08■□□□□ 0
GPATCH1-201ENST00000170564 LTKP29376 864 aa15.07■□□□□ 0
GPATCH1-201ENST00000170564 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
GPATCH1-201ENST00000170564 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
GPATCH1-201ENST00000170564 ADAMTS13Q76LX8 1427 aa15.06■□□□□ 0
GPATCH1-201ENST00000170564 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
GPATCH1-201ENST00000170564 NLRP1Q9C000 1473 aa15.06■□□□□ 0
GPATCH1-201ENST00000170564 KNDC1Q76NI1 1749 aa15.05■□□□□ 0
GPATCH1-201ENST00000170564 PUS7Q96PZ0 661 aaKnown RBP15.05■□□□□ -0
GPATCH1-201ENST00000170564 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
GPATCH1-201ENST00000170564 A0A1W2PP64 1363 aa15.04■□□□□ -0
GPATCH1-201ENST00000170564 ABCC11Q96J66 1382 aa15.04■□□□□ -0
GPATCH1-201ENST00000170564 RTN4Q9NQC3 1192 aaKnown RBP15.04■□□□□ -0
GPATCH1-201ENST00000170564 ANKRD36BQ8N2N9 1353 aa15.04■□□□□ -0
GPATCH1-201ENST00000170564 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
GPATCH1-201ENST00000170564 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
GPATCH1-201ENST00000170564 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
GPATCH1-201ENST00000170564 SHPRHQ149N8 1683 aa15.03■□□□□ -0
GPATCH1-201ENST00000170564 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
GPATCH1-201ENST00000170564 MED14O60244 1454 aa15.02■□□□□ -0
GPATCH1-201ENST00000170564 SLIT1O75093 1534 aa15.02□□□□□ -0.01
GPATCH1-201ENST00000170564 CPS1P31327 1500 aa15.02□□□□□ -0.01
GPATCH1-201ENST00000170564 POGKQ9P215 609 aa15.02□□□□□ -0.01
GPATCH1-201ENST00000170564 ARHGAP23Q9P227 1491 aa15.02□□□□□ -0.01
GPATCH1-201ENST00000170564 TECPR2O15040 1411 aa15.02□□□□□ -0.01
GPATCH1-201ENST00000170564 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
GPATCH1-201ENST00000170564 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.01□□□□□ -0.01
GPATCH1-201ENST00000170564 RIMS1Q86UR5 1692 aaKnown RBP15.01□□□□□ -0.01
GPATCH1-201ENST00000170564 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
GPATCH1-201ENST00000170564 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
GPATCH1-201ENST00000170564 TXNDC2Q86VQ3 553 aa15□□□□□ -0.01
GPATCH1-201ENST00000170564 INSRP06213 1382 aa15□□□□□ -0.01
GPATCH1-201ENST00000170564 PTPRUQ92729 1446 aa15□□□□□ -0.01
GPATCH1-201ENST00000170564 CCDC136Q96JN2 1154 aa15□□□□□ -0.01
GPATCH1-201ENST00000170564 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
GPATCH1-201ENST00000170564 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.99□□□□□ -0.01
GPATCH1-201ENST00000170564 ROBO2Q9HCK4 1378 aa14.99□□□□□ -0.01
GPATCH1-201ENST00000170564 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
GPATCH1-201ENST00000170564 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
GPATCH1-201ENST00000170564 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
GPATCH1-201ENST00000170564 ADAMTSL3P82987 1691 aa14.98□□□□□ -0.01
GPATCH1-201ENST00000170564 TNNT2P45379 298 aaPredicted RBP14.97□□□□□ -0.01
GPATCH1-201ENST00000170564 NUDCQ9Y266 331 aa14.97□□□□□ -0.01
GPATCH1-201ENST00000170564 ATAD2Q6PL18 1390 aa14.96□□□□□ -0.01
GPATCH1-201ENST00000170564 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
GPATCH1-201ENST00000170564 ANKRD26Q9UPS8 1709 aa14.96□□□□□ -0.01
GPATCH1-201ENST00000170564 FAM135BQ49AJ0 1406 aa14.96□□□□□ -0.01
GPATCH1-201ENST00000170564 CDCA7LQ96GN5 454 aa14.96□□□□□ -0.01
GPATCH1-201ENST00000170564 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
GPATCH1-201ENST00000170564 NINLQ9Y2I6 1382 aa14.96□□□□□ -0.02
GPATCH1-201ENST00000170564 CGNL1Q0VF96 1302 aa14.95□□□□□ -0.02
GPATCH1-201ENST00000170564 SLC26A8Q96RN1 970 aa14.95□□□□□ -0.02
GPATCH1-201ENST00000170564 CEP170BQ9Y4F5 1589 aaPredicted RBP14.95□□□□□ -0.02
GPATCH1-201ENST00000170564 ERICH6BQ5W0A0 696 aa14.94□□□□□ -0.02
GPATCH1-201ENST00000170564 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
GPATCH1-201ENST00000170564 KIF20BQ96Q89 1820 aa14.93□□□□□ -0.02
GPATCH1-201ENST00000170564 MORC1Q86VD1 984 aa14.93□□□□□ -0.02
GPATCH1-201ENST00000170564 FYB1O15117 783 aa14.93□□□□□ -0.02
GPATCH1-201ENST00000170564 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
GPATCH1-201ENST00000170564 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
GPATCH1-201ENST00000170564 ADGRB2O60241 1585 aa14.92□□□□□ -0.02
GPATCH1-201ENST00000170564 ATP7BP35670 1465 aa14.92□□□□□ -0.02
GPATCH1-201ENST00000170564 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 ZNF521Q96K83 1311 aa14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 PRR36Q9H6K5 1346 aa14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 CPSF1Q10570 1443 aaKnown RBP14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 ZNF142P52746 1687 aaPredicted RBP14.91□□□□□ -0.02
GPATCH1-201ENST00000170564 NSD2O96028 1365 aa14.9□□□□□ -0.02
GPATCH1-201ENST00000170564 MTHFSP49914 203 aa14.9□□□□□ -0.02
GPATCH1-201ENST00000170564 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
GPATCH1-201ENST00000170564 WDR43Q15061 677 aaKnown RBP eCLIP14.9□□□□□ -0.02
GPATCH1-201ENST00000170564 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
GPATCH1-201ENST00000170564 XRN1Q8IZH2 1706 aaKnown RBP14.89□□□□□ -0.03
GPATCH1-201ENST00000170564 PPIP5K1Q6PFW1 1433 aa14.89□□□□□ -0.03
GPATCH1-201ENST00000170564 AKAP12Q02952 1782 aa14.89□□□□□ -0.03
GPATCH1-201ENST00000170564 COL3A1P02461 1466 aaPredicted RBP14.89□□□□□ -0.03
GPATCH1-201ENST00000170564 CDC42BPGQ6DT37 1551 aa14.88□□□□□ -0.03
GPATCH1-201ENST00000170564 IPO9Q96P70 1041 aaKnown RBP14.88□□□□□ -0.03
GPATCH1-201ENST00000170564 FBLN1P23142 703 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms