RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
RANBP3-201ENST00000034275 STRCQ7RTU9 1775 aa23.34■■□□□ 1.33
RANBP3-201ENST00000034275 CHD2O14647 1828 aaKnown RBP23.34■■□□□ 1.33
RANBP3-201ENST00000034275 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
RANBP3-201ENST00000034275 PTCH1Q13635 1447 aa23.32■■□□□ 1.32
RANBP3-201ENST00000034275 PUS7Q96PZ0 661 aaKnown RBP23.3■■□□□ 1.32
RANBP3-201ENST00000034275 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
RANBP3-201ENST00000034275 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
RANBP3-201ENST00000034275 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
RANBP3-201ENST00000034275 CDK19Q9BWU1 502 aa23.27■■□□□ 1.32
RANBP3-201ENST00000034275 CABP2Q9NPB3 220 aa23.25■■□□□ 1.31
RANBP3-201ENST00000034275 WASLO00401 505 aaPredicted RBP23.24■■□□□ 1.31
RANBP3-201ENST00000034275 TULP4Q9NRJ4 1543 aa23.24■■□□□ 1.31
RANBP3-201ENST00000034275 PROSER2Q86WR7 435 aaPredicted RBP23.22■■□□□ 1.31
RANBP3-201ENST00000034275 NWD1Q149M9 1564 aa23.21■■□□□ 1.31
RANBP3-201ENST00000034275 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
RANBP3-201ENST00000034275 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.2■■□□□ 1.3
RANBP3-201ENST00000034275 ATAD2Q6PL18 1390 aa23.19■■□□□ 1.3
RANBP3-201ENST00000034275 NKTRP30414 1462 aaKnown RBP23.18■■□□□ 1.3
RANBP3-201ENST00000034275 C14orf37Q86TY3 774 aa23.18■■□□□ 1.3
RANBP3-201ENST00000034275 RBM33Q96EV2 1170 aaKnown RBP23.18■■□□□ 1.3
RANBP3-201ENST00000034275 PANK3Q9H999 370 aa23.18■■□□□ 1.3
RANBP3-201ENST00000034275 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
RANBP3-201ENST00000034275 ADGRB2O60241 1585 aa23.15■■□□□ 1.3
RANBP3-201ENST00000034275 NUDT16Q96DE0 195 aaKnown RBP23.14■■□□□ 1.29
RANBP3-201ENST00000034275 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
RANBP3-201ENST00000034275 NINLQ9Y2I6 1382 aa23.13■■□□□ 1.29
RANBP3-201ENST00000034275 CCDC61Q9Y6R9 512 aa23.13■■□□□ 1.29
RANBP3-201ENST00000034275 STRCP1A6NGW2 1772 aa23.12■■□□□ 1.29
RANBP3-201ENST00000034275 ANP32CO43423 234 aa23.11■■□□□ 1.29
RANBP3-201ENST00000034275 C19orf44Q9H6X5 657 aa23.11■■□□□ 1.29
RANBP3-201ENST00000034275 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
RANBP3-201ENST00000034275 ADGRL3Q9HAR2 1447 aa23.11■■□□□ 1.29
RANBP3-201ENST00000034275 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
RANBP3-201ENST00000034275 MYOM1P52179 1685 aa23.1■■□□□ 1.29
RANBP3-201ENST00000034275 PER1O15534 1290 aaPredicted RBP23.1■■□□□ 1.29
RANBP3-201ENST00000034275 TMEM94Q12767 1356 aa23.1■■□□□ 1.29
RANBP3-201ENST00000034275 NUTM2FA1L443 756 aa23.09■■□□□ 1.29
RANBP3-201ENST00000034275 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
RANBP3-201ENST00000034275 KNSTRNQ9Y448 316 aa23.09■■□□□ 1.29
RANBP3-201ENST00000034275 NALCNQ8IZF0 1738 aa23.07■■□□□ 1.28
RANBP3-201ENST00000034275 PRR36Q9H6K5 1346 aa23.07■■□□□ 1.28
RANBP3-201ENST00000034275 HDGFL2Q7Z4V5 671 aaPredicted RBP23.06■■□□□ 1.28
RANBP3-201ENST00000034275 MIER1Q8N108 512 aa23.06■■□□□ 1.28
RANBP3-201ENST00000034275 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
RANBP3-201ENST00000034275 ANKRD36BQ8N2N9 1353 aa23.05■■□□□ 1.28
RANBP3-201ENST00000034275 CDC42BPGQ6DT37 1551 aa23.04■■□□□ 1.28
RANBP3-201ENST00000034275 ATP7BP35670 1465 aa23.04■■□□□ 1.28
RANBP3-201ENST00000034275 ATF3P18847 181 aa23.04■■□□□ 1.28
RANBP3-201ENST00000034275 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
RANBP3-201ENST00000034275 ANKARQ7Z5J8 1434 aa23.03■■□□□ 1.28
RANBP3-201ENST00000034275 PLEKHG3A1L390 1219 aa23.01■■□□□ 1.27
RANBP3-201ENST00000034275 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
RANBP3-201ENST00000034275 ZNF692Q9BU19 519 aaPredicted RBP23.01■■□□□ 1.27
RANBP3-201ENST00000034275 MSH6P52701 1360 aa23.01■■□□□ 1.27
RANBP3-201ENST00000034275 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
RANBP3-201ENST00000034275 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
RANBP3-201ENST00000034275 A0A1W2PP64 1363 aa23■■□□□ 1.27
RANBP3-201ENST00000034275 CADPS2Q86UW7 1296 aa22.99■■□□□ 1.27
RANBP3-201ENST00000034275 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
RANBP3-201ENST00000034275 DCCP43146 1447 aa22.98■■□□□ 1.27
RANBP3-201ENST00000034275 CD163L1Q9NR16 1453 aa22.97■■□□□ 1.27
RANBP3-201ENST00000034275 USP32Q8NFA0 1604 aa22.97■■□□□ 1.27
RANBP3-201ENST00000034275 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
RANBP3-201ENST00000034275 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
RANBP3-201ENST00000034275 NSD3Q9BZ95 1437 aa22.96■■□□□ 1.27
RANBP3-201ENST00000034275 ACEP12821 1306 aa22.96■■□□□ 1.27
RANBP3-201ENST00000034275 RGPD8O14715 1765 aaPredicted RBP22.96■■□□□ 1.27
RANBP3-201ENST00000034275 KTN1Q86UP2 1357 aaKnown RBP22.96■■□□□ 1.27
RANBP3-201ENST00000034275 CPSF1Q10570 1443 aaKnown RBP22.96■■□□□ 1.27
RANBP3-201ENST00000034275 ITSN1Q15811 1721 aa22.96■■□□□ 1.27
RANBP3-201ENST00000034275 ESCO1Q5FWF5 840 aa22.96■■□□□ 1.27
RANBP3-201ENST00000034275 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
RANBP3-201ENST00000034275 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
RANBP3-201ENST00000034275 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.26
RANBP3-201ENST00000034275 RALBP1Q15311 655 aa22.94■■□□□ 1.26
RANBP3-201ENST00000034275 TOPAZ1Q8N9V7 1692 aa22.94■■□□□ 1.26
RANBP3-201ENST00000034275 XIRP1Q702N8 1843 aaKnown RBP22.94■■□□□ 1.26
RANBP3-201ENST00000034275 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
RANBP3-201ENST00000034275 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
RANBP3-201ENST00000034275 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
RANBP3-201ENST00000034275 ORAI2Q96SN7 254 aa22.9■■□□□ 1.26
RANBP3-201ENST00000034275 C1orf167Q5SNV9 1468 aa22.89■■□□□ 1.26
RANBP3-201ENST00000034275 EDC4Q6P2E9 1401 aaKnown RBP22.89■■□□□ 1.25
RANBP3-201ENST00000034275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.89■■□□□ 1.25
RANBP3-201ENST00000034275 LTBP4Q8N2S1 1624 aa22.88■■□□□ 1.25
RANBP3-201ENST00000034275 MST1RQ04912 1400 aa22.88■■□□□ 1.25
RANBP3-201ENST00000034275 AKAP12Q02952 1782 aa22.87■■□□□ 1.25
RANBP3-201ENST00000034275 PARD3Q8TEW0 1356 aa22.87■■□□□ 1.25
RANBP3-201ENST00000034275 CCER2I3L3R5 266 aa22.86■■□□□ 1.25
RANBP3-201ENST00000034275 FYB1O15117 783 aa22.86■■□□□ 1.25
RANBP3-201ENST00000034275 SLAIN2Q9P270 581 aa22.86■■□□□ 1.25
RANBP3-201ENST00000034275 NSD2O96028 1365 aa22.86■■□□□ 1.25
RANBP3-201ENST00000034275 PSME1Q06323 249 aa22.86■■□□□ 1.25
RANBP3-201ENST00000034275 USP6P35125 1406 aa22.85■■□□□ 1.25
RANBP3-201ENST00000034275 MORC1Q86VD1 984 aa22.85■■□□□ 1.25
RANBP3-201ENST00000034275 FOXO3O43524 673 aa22.84■■□□□ 1.25
RANBP3-201ENST00000034275 MON2Q7Z3U7 1717 aa22.84■■□□□ 1.25
RANBP3-201ENST00000034275 TTC21BQ7Z4L5 1316 aa22.83■■□□□ 1.25
RANBP3-201ENST00000034275 MYBBP1AQ9BQG0 1328 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms