RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.23
RGPD5-201ENST00000016946 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
RGPD5-201ENST00000016946 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
RGPD5-201ENST00000016946 PLB1Q6P1J6 1458 aa13.64□□□□□ -0.23
RGPD5-201ENST00000016946 RBM19Q9Y4C8 960 aaKnown RBP13.64□□□□□ -0.23
RGPD5-201ENST00000016946 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
RGPD5-201ENST00000016946 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
RGPD5-201ENST00000016946 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
RGPD5-201ENST00000016946 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
RGPD5-201ENST00000016946 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
RGPD5-201ENST00000016946 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 APPP05067 770 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 ATAD2Q6PL18 1390 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 ZKSCAN1P17029 563 aaPredicted RBP13.63□□□□□ -0.23
RGPD5-201ENST00000016946 CPLX2Q6PUV4 134 aaKnown RBP13.63□□□□□ -0.23
RGPD5-201ENST00000016946 ADGRL1O94910 1474 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
RGPD5-201ENST00000016946 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
RGPD5-201ENST00000016946 UBTFL1P0CB47 393 aaPredicted RBP13.62□□□□□ -0.23
RGPD5-201ENST00000016946 CCDC30Q5VVM6 783 aa13.62□□□□□ -0.23
RGPD5-201ENST00000016946 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
RGPD5-201ENST00000016946 RAD21O60216 631 aa13.62□□□□□ -0.23
RGPD5-201ENST00000016946 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
RGPD5-201ENST00000016946 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
RGPD5-201ENST00000016946 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
RGPD5-201ENST00000016946 DDX54Q8TDD1 881 aaKnown RBP13.62□□□□□ -0.23
RGPD5-201ENST00000016946 NBPF8Q3BBV2 869 aa13.61□□□□□ -0.23
RGPD5-201ENST00000016946 CTDP1Q9Y5B0 961 aaPredicted RBP13.61□□□□□ -0.23
RGPD5-201ENST00000016946 CCDC61Q9Y6R9 512 aa13.61□□□□□ -0.23
RGPD5-201ENST00000016946 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
RGPD5-201ENST00000016946 SF3A1Q15459 793 aaKnown RBP13.61□□□□□ -0.23
RGPD5-201ENST00000016946 REC8O95072 547 aa13.61□□□□□ -0.23
RGPD5-201ENST00000016946 L1TD1Q5T7N2 865 aaKnown RBP13.61□□□□□ -0.23
RGPD5-201ENST00000016946 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
RGPD5-201ENST00000016946 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
RGPD5-201ENST00000016946 XPCQ01831 940 aaPredicted RBP13.6□□□□□ -0.23
RGPD5-201ENST00000016946 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
RGPD5-201ENST00000016946 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
RGPD5-201ENST00000016946 ERC2O15083 957 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 TPM4P67936 248 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 CABP4P57796 275 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 TRDNQ13061 729 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
RGPD5-201ENST00000016946 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
RGPD5-201ENST00000016946 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
RGPD5-201ENST00000016946 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 H3BQV1 296 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 GNAI3P08754 354 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
RGPD5-201ENST00000016946 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.23
RGPD5-201ENST00000016946 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
RGPD5-201ENST00000016946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
RGPD5-201ENST00000016946 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
RGPD5-201ENST00000016946 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
RGPD5-201ENST00000016946 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
RGPD5-201ENST00000016946 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
RGPD5-201ENST00000016946 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
RGPD5-201ENST00000016946 DHX16O60231 1041 aaKnown RBP13.58□□□□□ -0.24
RGPD5-201ENST00000016946 RNF20Q5VTR2 975 aa13.58□□□□□ -0.24
RGPD5-201ENST00000016946 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
RGPD5-201ENST00000016946 ZC3H6P61129 1189 aaKnown RBP13.57□□□□□ -0.24
RGPD5-201ENST00000016946 AAMPQ13685 434 aa13.57□□□□□ -0.24
RGPD5-201ENST00000016946 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
RGPD5-201ENST00000016946 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
RGPD5-201ENST00000016946 AKNAQ7Z591 1439 aa13.57□□□□□ -0.24
RGPD5-201ENST00000016946 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
RGPD5-201ENST00000016946 CPLX1O14810 134 aa13.56□□□□□ -0.24
RGPD5-201ENST00000016946 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
RGPD5-201ENST00000016946 ANO2Q9NQ90 1003 aa13.56□□□□□ -0.24
RGPD5-201ENST00000016946 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
RGPD5-201ENST00000016946 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
RGPD5-201ENST00000016946 ATP6V1DQ9Y5K8 247 aa13.55□□□□□ -0.24
RGPD5-201ENST00000016946 MSNP26038 577 aaKnown RBP13.55□□□□□ -0.24
RGPD5-201ENST00000016946 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
RGPD5-201ENST00000016946 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
RGPD5-201ENST00000016946 IDI1Q13907 227 aa13.54□□□□□ -0.24
RGPD5-201ENST00000016946 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
RGPD5-201ENST00000016946 AMOTL2Q9Y2J4 779 aa13.54□□□□□ -0.24
RGPD5-201ENST00000016946 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
RGPD5-201ENST00000016946 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
RGPD5-201ENST00000016946 CLASRPQ8N2M8 674 aaKnown RBP13.53□□□□□ -0.24
RGPD5-201ENST00000016946 TRIM29Q14134 588 aa13.53□□□□□ -0.24
RGPD5-201ENST00000016946 ERICH2A1L162 156 aa13.53□□□□□ -0.24
RGPD5-201ENST00000016946 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
RGPD5-201ENST00000016946 TCEAL9Q9UHQ7 104 aa13.53□□□□□ -0.24
RGPD5-201ENST00000016946 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.24
RGPD5-201ENST00000016946 FOXD4L5Q5VV16 416 aaPredicted RBP13.52□□□□□ -0.24
RGPD5-201ENST00000016946 FOXD4L4Q8WXT5 416 aaPredicted RBP13.52□□□□□ -0.24
RGPD5-201ENST00000016946 LNPKQ9C0E8 428 aa13.52□□□□□ -0.24
RGPD5-201ENST00000016946 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.24
RGPD5-201ENST00000016946 CCDC27Q2M243 656 aa13.52□□□□□ -0.24
RGPD5-201ENST00000016946 PPP1R1BQ9UD71 204 aaPredicted RBP13.52□□□□□ -0.24
RGPD5-201ENST00000016946 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
RGPD5-201ENST00000016946 PDE4AP27815 886 aa13.52□□□□□ -0.25
RGPD5-201ENST00000016946 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
RGPD5-201ENST00000016946 NAIPQ13075 1403 aa13.52□□□□□ -0.25
RGPD5-201ENST00000016946 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms