RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ADAMTS13Q76LX8 1427 aa14.33□□□□□ -0.12
CD4-201ENST00000011653 EVC2Q86UK5 1308 aa14.33□□□□□ -0.12
CD4-201ENST00000011653 CDK19Q9BWU1 502 aa14.32□□□□□ -0.12
CD4-201ENST00000011653 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
CD4-201ENST00000011653 IQGAP1P46940 1657 aa14.31□□□□□ -0.12
CD4-201ENST00000011653 LRPPRCP42704 1394 aaKnown RBP14.31□□□□□ -0.12
CD4-201ENST00000011653 ROBO2Q9HCK4 1378 aa14.3□□□□□ -0.12
CD4-201ENST00000011653 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
CD4-201ENST00000011653 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
CD4-201ENST00000011653 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
CD4-201ENST00000011653 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
CD4-201ENST00000011653 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
CD4-201ENST00000011653 SETBP1Q9Y6X0 1596 aa14.28□□□□□ -0.12
CD4-201ENST00000011653 PTPRUQ92729 1446 aa14.28□□□□□ -0.12
CD4-201ENST00000011653 SLIT1O75093 1534 aa14.28□□□□□ -0.12
CD4-201ENST00000011653 CABP1Q9NZU7 370 aa14.27□□□□□ -0.12
CD4-201ENST00000011653 NRXN3Q9Y4C0 1643 aa14.27□□□□□ -0.12
CD4-201ENST00000011653 ABCC11Q96J66 1382 aa14.27□□□□□ -0.12
CD4-201ENST00000011653 LAMC1P11047 1609 aa14.27□□□□□ -0.13
CD4-201ENST00000011653 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
CD4-201ENST00000011653 NPHP4O75161 1426 aaPredicted RBP14.26□□□□□ -0.13
CD4-201ENST00000011653 PRKRIP1Q9H875 184 aaPredicted RBP14.26□□□□□ -0.13
CD4-201ENST00000011653 PROSER2Q86WR7 435 aaPredicted RBP14.25□□□□□ -0.13
CD4-201ENST00000011653 PMFBP1Q8TBY8 1022 aa14.25□□□□□ -0.13
CD4-201ENST00000011653 WASLO00401 505 aaPredicted RBP14.24□□□□□ -0.13
CD4-201ENST00000011653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.24□□□□□ -0.13
CD4-201ENST00000011653 QRICH2Q9H0J4 1663 aa14.24□□□□□ -0.13
CD4-201ENST00000011653 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
CD4-201ENST00000011653 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
CD4-201ENST00000011653 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
CD4-201ENST00000011653 ARHGEF28Q8N1W1 1705 aaKnown RBP14.23□□□□□ -0.13
CD4-201ENST00000011653 NUDT16Q96DE0 195 aaKnown RBP14.23□□□□□ -0.13
CD4-201ENST00000011653 CARD14Q9BXL6 1004 aa14.23□□□□□ -0.13
CD4-201ENST00000011653 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.13
CD4-201ENST00000011653 PER1O15534 1290 aaPredicted RBP14.21□□□□□ -0.13
CD4-201ENST00000011653 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.13
CD4-201ENST00000011653 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
CD4-201ENST00000011653 TULP4Q9NRJ4 1543 aa14.2□□□□□ -0.14
CD4-201ENST00000011653 SBNO2Q9Y2G9 1366 aa14.19□□□□□ -0.14
CD4-201ENST00000011653 SOX12O15370 315 aa14.19□□□□□ -0.14
CD4-201ENST00000011653 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
CD4-201ENST00000011653 SETD1AO15047 1707 aaKnown RBP14.18□□□□□ -0.14
CD4-201ENST00000011653 MED14O60244 1454 aa14.18□□□□□ -0.14
CD4-201ENST00000011653 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
CD4-201ENST00000011653 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
CD4-201ENST00000011653 HDGFL2Q7Z4V5 671 aaPredicted RBP14.18□□□□□ -0.14
CD4-201ENST00000011653 LMTK3Q96Q04 1460 aa14.18□□□□□ -0.14
CD4-201ENST00000011653 ZNF142P52746 1687 aaPredicted RBP14.18□□□□□ -0.14
CD4-201ENST00000011653 ZNF335Q9H4Z2 1342 aaPredicted RBP14.18□□□□□ -0.14
CD4-201ENST00000011653 PRR36Q9H6K5 1346 aa14.18□□□□□ -0.14
CD4-201ENST00000011653 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
CD4-201ENST00000011653 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
CD4-201ENST00000011653 TERF2IPQ9NYB0 399 aa14.17□□□□□ -0.14
CD4-201ENST00000011653 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
CD4-201ENST00000011653 FBLN1P23142 703 aa14.16□□□□□ -0.14
CD4-201ENST00000011653 POLR1AO95602 1720 aaPredicted RBP14.16□□□□□ -0.14
CD4-201ENST00000011653 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
CD4-201ENST00000011653 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
CD4-201ENST00000011653 ATAD2Q6PL18 1390 aa14.15□□□□□ -0.14
CD4-201ENST00000011653 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
CD4-201ENST00000011653 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
CD4-201ENST00000011653 A0A1W2PP64 1363 aa14.15□□□□□ -0.14
CD4-201ENST00000011653 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
CD4-201ENST00000011653 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
CD4-201ENST00000011653 NUTM2GQ5VZR2 741 aa14.15□□□□□ -0.14
CD4-201ENST00000011653 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
CD4-201ENST00000011653 FAM135BQ49AJ0 1406 aa14.14□□□□□ -0.15
CD4-201ENST00000011653 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
CD4-201ENST00000011653 PPIP5K1Q6PFW1 1433 aa14.14□□□□□ -0.15
CD4-201ENST00000011653 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
CD4-201ENST00000011653 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
CD4-201ENST00000011653 SIRT1Q96EB6 747 aa14.13□□□□□ -0.15
CD4-201ENST00000011653 TECPR2O15040 1411 aa14.13□□□□□ -0.15
CD4-201ENST00000011653 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
CD4-201ENST00000011653 ACEP12821 1306 aa14.12□□□□□ -0.15
CD4-201ENST00000011653 DLC1Q96QB1 1528 aa14.12□□□□□ -0.15
CD4-201ENST00000011653 ORAI2Q96SN7 254 aa14.12□□□□□ -0.15
CD4-201ENST00000011653 CGNL1Q0VF96 1302 aa14.11□□□□□ -0.15
CD4-201ENST00000011653 NME9Q86XW9 330 aa14.11□□□□□ -0.15
CD4-201ENST00000011653 TMEM94Q12767 1356 aa14.11□□□□□ -0.15
CD4-201ENST00000011653 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.11□□□□□ -0.15
CD4-201ENST00000011653 RALBP1Q15311 655 aa14.11□□□□□ -0.15
CD4-201ENST00000011653 ATF3P18847 181 aa14.1□□□□□ -0.15
CD4-201ENST00000011653 PIK3R4Q99570 1358 aa14.1□□□□□ -0.15
CD4-201ENST00000011653 FOXO3O43524 673 aa14.1□□□□□ -0.15
CD4-201ENST00000011653 MYBBP1AQ9BQG0 1328 aaKnown RBP14.1□□□□□ -0.15
CD4-201ENST00000011653 ANKRD36BQ8N2N9 1353 aa14.1□□□□□ -0.15
CD4-201ENST00000011653 DDX17Q92841 729 aaKnown RBP14.1□□□□□ -0.15
CD4-201ENST00000011653 CPS1P31327 1500 aa14.09□□□□□ -0.15
CD4-201ENST00000011653 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.15
CD4-201ENST00000011653 MYOM1P52179 1685 aa14.08□□□□□ -0.16
CD4-201ENST00000011653 ZBTB7CA1YPR0 619 aa14.08□□□□□ -0.16
CD4-201ENST00000011653 FYB1O15117 783 aa14.08□□□□□ -0.16
CD4-201ENST00000011653 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
CD4-201ENST00000011653 PTCH1Q13635 1447 aa14.08□□□□□ -0.16
CD4-201ENST00000011653 DIP2AQ14689 1571 aa14.08□□□□□ -0.16
CD4-201ENST00000011653 NLRP13Q86W25 1043 aa14.07□□□□□ -0.16
CD4-201ENST00000011653 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
CD4-201ENST00000011653 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
CD4-201ENST00000011653 IRX6P78412 446 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms