RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 ZNF330Q9Y3S2 320 aaPredicted RBP5.32□□□□□ -1.56
CFTR-201ENST00000003084 PLB1Q6P1J6 1458 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 KIAA1107Q9UPP5 1409 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 HSCBQ8IWL3 235 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 MAP3K1Q13233 1512 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 DIAPH1O60610 1272 aaKnown RBP5.32□□□□□ -1.56
CFTR-201ENST00000003084 TXNDC2Q86VQ3 553 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 AFAP1Q8N556 730 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 CCDC24Q8N4L8 307 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 RGS3P49796 1198 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 ANKLE2Q86XL3 938 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.32□□□□□ -1.56
CFTR-201ENST00000003084 PTMSP20962 102 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 HMGB2P26583 209 aaKnown RBP5.31□□□□□ -1.56
CFTR-201ENST00000003084 SMG6Q86US8 1419 aaKnown RBP5.31□□□□□ -1.56
CFTR-201ENST00000003084 E9PSI1 815 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 CTHP32929 405 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 TEX14Q8IWB6 1497 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 TEFQ10587 303 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 DNAJC5BQ9UF47 199 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 NAP1L2Q9ULW6 460 aaPredicted RBP5.31□□□□□ -1.56
CFTR-201ENST00000003084 CHMP3Q9Y3E7 222 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 WASHC2AQ641Q2 1341 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 PROSER2Q86WR7 435 aaPredicted RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 ADGRL1O94910 1474 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 ANKRD30BQ9BXX2 1392 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 PCF11O94913 1555 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 THOC2Q8NI27 1593 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 CAMSAP2Q08AD1 1489 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 CDK13Q14004 1512 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 SENP3-EIF4A1A0A087X0R7 540 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 DDX58O95786 925 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 CCDC146Q8IYE0 955 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 LMNB1P20700 586 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 NEXNQ0ZGT2 675 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 LRRFIP1Q32MZ4 808 aaKnown RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 CHMP4CQ96CF2 233 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 ZFP91Q96JP5 570 aaPredicted RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 DENND4BO75064 1496 aaPredicted RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 HTATSF1O43719 755 aaKnown RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 RNF39Q9H2S5 420 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 GJA3Q9Y6H8 435 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 CNTLNQ9NXG0 1405 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 GNL2Q13823 731 aaKnown RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 RAPGEF4Q8WZA2 1011 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 WDR97A6NE52 1622 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 ERBINQ96RT1 1412 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 PDE4AP27815 886 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 RUNDC1Q96C34 613 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 GOLGA6L4A6NEF3 574 aa5.28□□□□□ -1.56
CFTR-201ENST00000003084 PTPN23Q9H3S7 1636 aa5.28□□□□□ -1.56
CFTR-201ENST00000003084 ARHGEF11O15085 1522 aa5.28□□□□□ -1.56
CFTR-201ENST00000003084 TRIM44Q96DX7 344 aaPredicted RBP5.28□□□□□ -1.56
CFTR-201ENST00000003084 ISY1Q9ULR0 285 aaKnown RBP5.28□□□□□ -1.56
CFTR-201ENST00000003084 ARID5BQ14865 1188 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 SLC4A10Q6U841 1118 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 NRDCO43847 1150 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 HSP90B1P14625 803 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 GNAI1P63096 354 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 API5Q9BZZ5 524 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 CCDC7Q96M83 1385 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 TBC1D8BQ0IIM8 1120 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 ZKSCAN2Q63HK3 967 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 L3MBTL3Q96JM7 780 aaPredicted RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 TSHZ2Q9NRE2 1034 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 RAPGEF6Q8TEU7 1601 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 RTEL1-TNFRSF6BF6WH68 1400 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 PLEKHO1Q53GL0 409 aaPredicted RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 GAS2L2Q8NHY3 880 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 NOL10Q9BSC4 688 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 AMOTL1Q8IY63 956 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 VSIG10Q8N0Z9 540 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 PTMAP06454 111 aaKnown RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 ANKRD13DQ6ZTN6 518 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 REM2Q8IYK8 340 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 ATAD2Q6PL18 1390 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 FAM135AQ9P2D6 1515 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 ZBTB24O43167 697 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 RAPGEF3O95398 923 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 GPIHBP1Q8IV16 184 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 PRKRIP1Q9H875 184 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 WDR62O43379 1518 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 ADAMTS12P58397 1594 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 FRAT2O75474 233 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 FANCAO15360 1455 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 RIPK4P57078 832 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 ITSN2Q9NZM3 1697 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 TRIM6-TRIM34B2RNG4 842 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 APBB1O00213 710 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 ABTB2Q8N961 1025 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 CCDC34Q96HJ3 373 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 PRAM1Q96QH2 718 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 CDK19Q9BWU1 502 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms