RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 TnikP83510 1323 aa13.61□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Dapk1Q80YE7 1442 aa13.61□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Pcmtd1P59913 357 aa13.6□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Pla2r1Q62028 1487 aa13.6□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Rad54l2Q99NG0 1466 aa13.6□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 L3mbtl2P59178 703 aa13.6□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Znf330Q922H9 316 aa13.6□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Rusc2Q80U22 1514 aa13.6□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Zmym4A2A791 1549 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Soga1E1U8D0 1418 aa13.59□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Kdm3bQ6ZPY7 1562 aa13.58□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Psme1P97371 249 aa13.58□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Pxylp1Q8BHA9 480 aa13.58□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Rem2Q8VEL9 341 aa13.58□□□□□ -0.23
Pdlim5-204ENSMUST00000168967 Arhgef40Q3UPH7 1517 aa13.58□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Map3k4O08648 1597 aa13.58□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Prkrip1Q9CWV6 186 aaKnown RBP13.56□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Adamts12Q811B3 1600 aa13.56□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Mtus2Q3UHD3 1353 aa13.55□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Scarf1Q5ND28 820 aa13.55□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Nob1Q8BW10 403 aa13.55□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Pcdhgb4Q91XX6 912 aa13.55□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Mug2P28666 1451 aa13.54□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Irx3P81067 507 aa13.54□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Anp32bQ9EST5 272 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 AlkP97793 1621 aa13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Cpsf1Q9EPU4 1441 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 NeflP08551 543 aa13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Rundc1Q0VDN7 615 aa13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Gtf3c3Q3TMP1 882 aa13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Pabpn1Q8CCS6 302 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Mbd3Q9Z2D8 285 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 RalgapbQ8BQZ4 1484 aa13.52□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Magi3Q9EQJ9 1476 aa13.52□□□□□ -0.24
Pdlim5-204ENSMUST00000168967 Iqcf3Q9D498 203 aa13.52□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 SphkapQ6NSW3 1687 aa13.52□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Ttll13A4Q9F6 804 aa13.51□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Slc4a3P16283 1227 aa13.51□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Card11Q8CIS0 1159 aa13.51□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Gapvd1Q6PAR5 1458 aa13.51□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Zfp644E9QA22 1323 aa13.51□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Kif14L0N7N1 1674 aaKnown RBP13.5□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Rapgef6Q5NCJ1 1609 aa13.49□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Pbx2O35984 430 aa13.49□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Col9a1Q05722 921 aa13.49□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Arid4bA2CG63 1314 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Amer1Q7TS75 1132 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Ncoa3O09000 1398 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Zmym3Q9JLM4 1370 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Setd1bQ8CFT2 1985 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Col17a1Q07563 1470 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Ttc41Q692V3 1318 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Nup160Q9Z0W3 1402 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Trpm2Q91YD4 1506 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Prpmp5E9PXN1 296 aa13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Mak16Q8BGS0 296 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Grin2aP35436 1464 aa13.47□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 WizO88286 1684 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Adcy10Q8C0T9 1614 aa13.47□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Phox2bO35690 314 aa13.47□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Zscan21Q07231 555 aa13.47□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Ripply1Q2WG77 201 aa13.47□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Asxl1P59598 1514 aa13.46□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Polr3aB2RXC6 1390 aa13.46□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Dhx57Q6P5D3 1388 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Gm20503G3UZK1 150 aa13.46□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Mfsd10Q9D2V8 456 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Kiaa1551Q5DTW7 1521 aa13.46□□□□□ -0.25
Pdlim5-204ENSMUST00000168967 Erbb3Q61526 1339 aa13.46□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Wdr7Q920I9 1489 aa13.46□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Arhgap27A2AB59 869 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Ppfia1B2RXQ2 1266 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Rgs9O54828 675 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Hmx1O70218 332 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Setd1aE9PYH6 1716 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Kdm6bQ5NCY0 1641 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Gm11939A2A592 99 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Znf354bQ9QXT9 601 aa13.45□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Dhx9O70133 1380 aaKnown RBP13.44□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Kcnh8P59111 1102 aa13.44□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Rgl3Q3UYI5 709 aa13.44□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Cdc42bpaQ3UU96 1719 aa13.44□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Pbrm1Q8BSQ9 1634 aaKnown RBP13.44□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Rock1P70335 1354 aa13.43□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Cc2d2bA0A286YDU8 1405 aa13.43□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Arhgef11Q68FM7 1552 aa13.43□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Adgrb2Q8CGM1 1561 aa13.43□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 OplahQ8K010 1288 aa13.43□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Rhox13F6YCR7 232 aa13.43□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Ttbk1Q6PCN3 1308 aa13.42□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Iqgap1Q9JKF1 1657 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Zfp444Q3TDV8 331 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 MetrnQ8C1Q4 291 aa13.41□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Ttll5Q8CHB8 1328 aa13.41□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Supt6hQ62383 1726 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 WrnO09053 1401 aa13.4□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Tubgcp6G5E8P0 1769 aa13.4□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Ccdc141E9Q8Q6 1531 aa13.4□□□□□ -0.26
Pdlim5-204ENSMUST00000168967 Cdk13Q69ZA1 1511 aaKnown RBP13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Pcdh10E9PXQ7 1057 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 85.8 ms