RNA–Protein interactions for RNA: ENSMUST00000106736.2

Lrif1-203, Transcript of Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

TSL 1 (best) BASIC

Gene Lrif1, Length 1,669 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1-203ENSMUST00000106736 Scaf1Q5U4C3 1256 aaKnown RBP8.84□□□□□ -0.99
Lrif1-203ENSMUST00000106736 Grin2aP35436 1464 aa8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 AqrQ8CFQ3 1481 aaKnown RBP8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 Clip1Q922J3 1391 aa8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 Large2Q5XPT3 690 aa8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 Mtfr1Q99MB2 328 aa8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 Map3k14Q9WUL6 942 aa8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 Nup160Q9Z0W3 1402 aaKnown RBP8.83□□□□□ -1
Lrif1-203ENSMUST00000106736 Eif4g3Q80XI3 1579 aaKnown RBP8.82□□□□□ -1
Lrif1-203ENSMUST00000106736 Carmil1Q6EDY6 1374 aa8.82□□□□□ -1
Lrif1-203ENSMUST00000106736 Rbm46P86049 533 aa8.82□□□□□ -1
Lrif1-203ENSMUST00000106736 Grxcr1Q50H32 290 aa8.82□□□□□ -1
Lrif1-203ENSMUST00000106736 Tsen34Q8BMZ5 316 aa8.82□□□□□ -1
Lrif1-203ENSMUST00000106736 Adam26aQ9R158 697 aa8.82□□□□□ -1
Lrif1-203ENSMUST00000106736 Adam33Q923W9 797 aa8.81□□□□□ -1
Lrif1-203ENSMUST00000106736 Jmjd4Q8BFT6 427 aa8.81□□□□□ -1
Lrif1-203ENSMUST00000106736 Ankrd34aB2RW11 495 aa8.8□□□□□ -1
Lrif1-203ENSMUST00000106736 Map3k9Q3U1V8 1077 aa8.79□□□□□ -1
Lrif1-203ENSMUST00000106736 Cyp7a1Q64505 503 aa8.79□□□□□ -1
Lrif1-203ENSMUST00000106736 Rusc2Q80U22 1514 aa8.79□□□□□ -1
Lrif1-203ENSMUST00000106736 EprsQ8CGC7 1512 aaKnown RBP8.78□□□□□ -1
Lrif1-203ENSMUST00000106736 Pbrm1Q8BSQ9 1634 aaKnown RBP8.77□□□□□ -1
Lrif1-203ENSMUST00000106736 Cc2d2bA0A286YDU8 1405 aa8.77□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Cux1P53564 1515 aa8.77□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Pcmtd1P59913 357 aa8.77□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Cyp8b1O88962 500 aa8.76□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Znf330Q922H9 316 aa8.76□□□□□ -1.01
Lrif1-203ENSMUST00000106736 IrgqQ8VIM9 583 aa8.75□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Ankrd26Q811D2 1581 aa8.75□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Gmpr2Q99L27 348 aa8.75□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Hoxb4P10284 250 aa8.74□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Cops2P61202 443 aaKnown RBP8.74□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Rnf40Q3U319 1001 aa8.74□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Setd5Q5XJV7 1441 aa8.74□□□□□ -1.01
Lrif1-203ENSMUST00000106736 PxdnQ3UQ28 1475 aa8.73□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Eea1Q8BL66 1411 aa8.73□□□□□ -1.01
Lrif1-203ENSMUST00000106736 CadpsQ80TJ1 1355 aa8.73□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Setd1bQ8CFT2 1985 aa8.73□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Man1a2P39098 641 aa8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Ap3b1Q9Z1T1 1105 aa8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 WizO88286 1684 aaKnown RBP8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Gm7298A0A0N4SVU1 1476 aa8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Arap1Q4LDD4 1452 aa8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Dph2Q9CR25 489 aa8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Cysrt1Q9D1E4 142 aa8.72□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Adamts12Q811B3 1600 aa8.71□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Rpap1Q80TE0 1409 aa8.71□□□□□ -1.01
Lrif1-203ENSMUST00000106736 Fyco1Q8VDC1 1437 aa8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 TchhA0A0B4J1F9 1599 aa8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Gm38119A0A0A6YX29 146 aa8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Gm3233E9Q2H5 230 aa8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Sulf1Q8K007 870 aa8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Abcc2Q8VI47 1543 aa8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Polr1aO35134 1717 aaKnown RBP8.7□□□□□ -1.02
Lrif1-203ENSMUST00000106736 OatP29758 439 aa8.69□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Abca16E9PWJ7 1678 aa8.69□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Arhgap27A2AB59 869 aa8.69□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Dsg2O55111 1122 aa8.69□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Erich3F6QRE9 1637 aa8.68□□□□□ -1.02
Lrif1-203ENSMUST00000106736 AW822073A0A0N4SUK1 652 aa8.68□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Atf4Q06507 349 aa8.68□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Soga1E1U8D0 1418 aa8.68□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Pola2P33611 600 aa8.67□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Fkbp15Q6P9Q6 1216 aaKnown RBP8.67□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Abca5Q8K448 1642 aa8.67□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Pcf11G3X9Z4 1553 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 MsmpB1AWI6 139 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Nos2P29477 1144 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Aebp1Q640N1 1128 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 MarsQ68FL6 902 aaKnown RBP8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 FcrlaQ920A9 352 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Spaca7Q9D2S4 182 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Speer3W4VSP1 261 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Arhgef5E9Q7D5 1581 aa8.66□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Fgd6Q69ZL1 1399 aa8.65□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Lmo7E9PYF4 1699 aaKnown RBP8.65□□□□□ -1.02
Lrif1-203ENSMUST00000106736 Trbv21A0A0A6YX06 97 aa8.65□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Ppfia1B2RXQ2 1266 aa8.65□□□□□ -1.03
Lrif1-203ENSMUST00000106736 AvpP35455 168 aa8.65□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Scube3Q66PY1 993 aa8.65□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Shroom2A2ALU4 1481 aa8.64□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Map3k4O08648 1597 aa8.63□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Nsfl1cQ9CZ44 370 aaKnown RBP8.63□□□□□ -1.03
Lrif1-203ENSMUST00000106736 WrnO09053 1401 aa8.63□□□□□ -1.03
Lrif1-203ENSMUST00000106736 BlmO88700 1416 aa8.63□□□□□ -1.03
Lrif1-203ENSMUST00000106736 MlecQ6ZQI3 291 aaKnown RBP8.62□□□□□ -1.03
Lrif1-203ENSMUST00000106736 AknaQ80VW7 1404 aa8.62□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Naip1Q9QWK5 1403 aa8.62□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Dnmt1P13864 1620 aaKnown RBP8.61□□□□□ -1.03
Lrif1-203ENSMUST00000106736 CntlnA2AM05 1397 aa8.61□□□□□ -1.03
Lrif1-203ENSMUST00000106736 BC005561E9Q5E2 1589 aa8.61□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Slx4Q6P1D7 1565 aa8.61□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Neo1P97798 1493 aa8.61□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Tiam1Q60610 1591 aa8.6□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Recql4Q75NR7 1216 aaKnown RBP8.6□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Nxf1Q99JX7 618 aaKnown RBP8.6□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Galnt6Q8C7U7 622 aa8.59□□□□□ -1.03
Lrif1-203ENSMUST00000106736 NppbP40753 121 aa8.59□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Spink5Q148R4 1017 aa8.59□□□□□ -1.03
Lrif1-203ENSMUST00000106736 Lmod2Q3UHZ5 550 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms