RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Fmnl2A2APV2 1086 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Map3k7clP58500 142 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Fan1Q69ZT1 1020 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Erc2Q6PH08 957 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Kif3bQ61771 747 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Gtf2a1Q99PM3 378 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 UvssaQ9D479 717 aa16.64■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Rbm25B2RY56 838 aaKnown RBP16.63■□□□□ 0.25
Col5a1-201ENSMUST00000028280 ItpripQ3TNL8 555 aa16.63■□□□□ 0.25
Col5a1-201ENSMUST00000028280 CenphQ9QYM8 241 aa16.63■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Me1P06801 572 aa16.63■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Ccdc96Q9CR92 584 aa16.63■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Phldb2Q8K1N2 1249 aa16.62■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Phf14Q9D4H9 881 aa16.62■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Nat10Q8K224 1024 aaKnown RBP16.62■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Pak3Q61036 559 aa16.61■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Nol12Q8BG17 217 aa16.61■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Psma5Q9Z2U1 241 aaKnown RBP16.61■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Cetn4Q8K4K1 168 aa16.61■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Slc13a4Q8BZ82 625 aa16.61■□□□□ 0.25
Col5a1-201ENSMUST00000028280 AcrbpQ3V140 540 aa16.6■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Arhgef18Q6P9R4 1021 aa16.6■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Spag5Q7TME2 1165 aa16.6■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Ccdc102aQ3TMW1 549 aa16.6■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Neurod6P48986 337 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Q8C5K5 320 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Ankrd36D3Z4K0 1415 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Q9D2X8 372 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Dapk1Q80YE7 1442 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Rnf187Q8BFX1 236 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Pip4k2aO70172 405 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Kcnj4P52189 445 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Arid3cA6PWV5 409 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Secisbp2lQ6A098 1086 aaKnown RBP16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Cabp4Q8VHC5 271 aa16.59■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Utp14aQ640M1 767 aaKnown RBP16.58■□□□□ 0.25
Col5a1-201ENSMUST00000028280 CastP51125 788 aa16.58■□□□□ 0.25
Col5a1-201ENSMUST00000028280 Eif3aP23116 1344 aaKnown RBP16.58■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Triml2E9PW10 424 aa16.58■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Fez1Q8K0X8 392 aa16.58■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Hmox1P14901 289 aa16.57■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Ints3Q7TPD0 1041 aaKnown RBP16.57■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Lrrc45Q8CIM1 670 aa16.57■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Ccnb3Q810T2 1396 aa16.57■□□□□ 0.24
Col5a1-201ENSMUST00000028280 WrnO09053 1401 aa16.57■□□□□ 0.24
Col5a1-201ENSMUST00000028280 KarsQ99MN1 595 aaKnown RBP16.56■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Ncoa2Q61026 1462 aa16.56■□□□□ 0.24
Col5a1-201ENSMUST00000028280 MicalclQ9D5U9 680 aa16.56■□□□□ 0.24
Col5a1-201ENSMUST00000028280 IncenpQ9WU62 880 aa16.56■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Rapgef2Q8CHG7 1496 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Plekhh1Q80TI1 1356 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Chmp7Q8R1T1 451 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Inpp5dQ9ES52 1191 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 ScribQ80U72 1612 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Fam184bQ0KK56 942 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Synj1Q8CHC4 1574 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Ift57Q8BXG3 429 aa16.55■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Gsdma3Q5Y4Y6 464 aa16.54■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Themis2Q91YX0 663 aa16.54■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Abcd1P48410 736 aa16.54■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Ppm1fQ8CGA0 452 aa16.54■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Carmil1Q6EDY6 1374 aa16.54■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Stim1P70302 685 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Prkrip1Q9CWV6 186 aaKnown RBP16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Homer1Q9Z2Y3 366 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Map2k1P31938 393 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Erich4Q3UNU4 136 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 AnlnQ8K298 1121 aaKnown RBP16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Mipol1Q9D9F8 279 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 NexnQ7TPW1 607 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Otud6bQ8K2H2 294 aa16.53■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Frmd3Q8BHD4 595 aa16.52■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Ccdc183A2AJB1 534 aa16.52■□□□□ 0.24
Col5a1-201ENSMUST00000028280 Larp1Q6ZQ58 1072 aaKnown RBP16.52■□□□□ 0.24
Col5a1-201ENSMUST00000028280 TxlnaQ6PAM1 554 aaKnown RBP16.52■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Usp40Q8BWR4 1235 aa16.52■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Tmx4Q8C0L0 335 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 TnmdQ9EP64 317 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Mcm2P97310 904 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ric3Q8BPM6 367 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Crybg2B7ZCC2 1516 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Gnai1B2RSH2 354 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Lamb3Q61087 1168 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Gnai3Q9DC51 354 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Gm42641I6L9G2 585 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 AtripQ8BMG1 785 aa16.51■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Rbm28Q8CGC6 750 aaKnown RBP16.5■□□□□ 0.23
Col5a1-201ENSMUST00000028280 StambpQ9CQ26 424 aa16.5■□□□□ 0.23
Col5a1-201ENSMUST00000028280 ClasrpQ8CFC7 668 aa16.5■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Dydc1Q9D9T0 175 aa16.5■□□□□ 0.23
Col5a1-201ENSMUST00000028280 L1td1Q587J6 782 aaKnown RBP16.5■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Cfap58B2RW38 873 aa16.49■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Olfml1Q8BSH2 233 aa16.49■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Erc1Q99MI1 1120 aa16.49■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Jakmip2D3YXK0 820 aa16.49■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Smarca2Q6DIC0 1577 aa16.49■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ccdc171E9Q1U1 1324 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ccdc112A0AUP1 442 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Tax1bp1Q3UKC1 814 aaKnown RBP16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Smarca4Q3TKT4 1613 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms