RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 DYN2Q02647 92 aa-2.28□□□□□ -2.77
snR50snR50 YMR090WQ04304 227 aaKnown RBP-2.28□□□□□ -2.77
snR50snR50 NOP10Q6Q547 58 aaPredicted RBP-2.28□□□□□ -2.77
snR50snR50 IRC20Q06554 1556 aa-2.28□□□□□ -2.77
snR50snR50 YDR042CQ03205 200 aa-2.29□□□□□ -2.78
snR50snR50 YBR200W-AQ3E755 54 aa-2.31□□□□□ -2.78
snR50snR50 ATP17Q06405 101 aa-2.32□□□□□ -2.78
snR50snR50 XRN1P22147 1528 aaKnown RBP-2.33□□□□□ -2.78
snR50snR50 RRT15Q3E811 62 aa-2.34□□□□□ -2.78
snR50snR50 YPL225WQ08971 146 aaKnown RBP-2.35□□□□□ -2.79
snR50snR50 YIL156W-BQ2V2P4 73 aa-2.35□□□□□ -2.79
snR50snR50 YOR011W-AQ3E807 68 aa-2.35□□□□□ -2.79
snR50snR50 Q0017Q9ZZX8 53 aa-2.35□□□□□ -2.79
snR50snR50 PDR11P40550 1411 aa-2.35□□□□□ -2.79
snR50snR50 TY3B-GQ99315 1547 aa-2.36□□□□□ -2.79
snR50snR50 CHD1P32657 1468 aa-2.36□□□□□ -2.79
snR50snR50 WIP1Q2V2P8 89 aa-2.36□□□□□ -2.79
snR50snR50 VPS15P22219 1454 aa-2.37□□□□□ -2.79
snR50snR50 YER039C-AP0CD97 72 aa-2.37□□□□□ -2.79
snR50snR50 YGR146C-AQ8TGT9 53 aa-2.37□□□□□ -2.79
snR50snR50 KOG1P38873 1557 aa-2.37□□□□□ -2.79
snR50snR50 NUM1Q00402 2748 aa-2.37□□□□□ -2.79
snR50snR50 RPS27BP38711 82 aa-2.38□□□□□ -2.79
snR50snR50 POL1P13382 1468 aa-2.39□□□□□ -2.79
snR50snR50 YBL039W-BP0C268 59 aa-2.39□□□□□ -2.79
snR50snR50 KSH1Q8TGJ3 72 aa-2.39□□□□□ -2.79
snR50snR50 SUS1Q6WNK7 96 aa-2.4□□□□□ -2.79
snR50snR50 SPP41P38904 1435 aa-2.41□□□□□ -2.79
snR50snR50 YOR105WQ08504 108 aa-2.41□□□□□ -2.8
snR50snR50 YOR192C-CQ3E736 78 aa-2.41□□□□□ -2.8
snR50snR50 APC1P53886 1748 aa-2.42□□□□□ -2.8
snR50snR50 YDL022C-AP0C5L6 82 aa-2.42□□□□□ -2.8
snR50snR50 GEA1P47102 1408 aaPredicted RBP-2.44□□□□□ -2.8
snR50snR50 MSL1P40567 111 aaPredicted RBP-2.45□□□□□ -2.8
snR50snR50 YOR314WQ12506 109 aa-2.45□□□□□ -2.8
snR50snR50 UTP10P42945 1769 aaKnown RBP-2.46□□□□□ -2.8
snR50snR50 FIG2P25653 1609 aa-2.46□□□□□ -2.8
snR50snR50 PDR10P51533 1564 aa-2.47□□□□□ -2.8
snR50snR50 HAP1P0CE41 1502 aa-2.47□□□□□ -2.81
snR50snR50 YMR082CQ04276 118 aa-2.49□□□□□ -2.81
snR50snR50 GDB1Q06625 1536 aa-2.49□□□□□ -2.81
snR50snR50 YOR304C-AO14468 76 aa-2.51□□□□□ -2.81
snR50snR50 YBR230W-AQ3E762 66 aa-2.51□□□□□ -2.81
snR50snR50 CSF1Q12150 2958 aa-2.52□□□□□ -2.81
snR50snR50 REV3P14284 1504 aa-2.52□□□□□ -2.81
snR50snR50 YML054C-AQ3E809 52 aa-2.52□□□□□ -2.81
snR50snR50 GEA2P39993 1459 aaKnown RBP-2.52□□□□□ -2.81
snR50snR50 YKL065W-AQ2V2P2 73 aa-2.53□□□□□ -2.81
snR50snR50 RPA190P10964 1664 aaKnown RBP-2.54□□□□□ -2.82
snR50snR50 RPS12P48589 143 aaKnown RBP-2.56□□□□□ -2.82
snR50snR50 YOR032W-AQ8TGS1 66 aa-2.56□□□□□ -2.82
snR50snR50 SIN3P22579 1536 aa-2.58□□□□□ -2.82
snR50snR50 TSC11P40061 1430 aa-2.58□□□□□ -2.82
snR50snR50 YGL194C-AQ2V2P6 80 aa-2.59□□□□□ -2.82
snR50snR50 SWR1Q05471 1514 aa-2.59□□□□□ -2.82
snR50snR50 SPI1P40092 148 aa-2.6□□□□□ -2.83
snR50snR50 QCR9P22289 66 aa-2.62□□□□□ -2.83
snR50snR50 SSS1P35179 80 aa-2.62□□□□□ -2.83
snR50snR50 YPR145C-AQ2V2P0 78 aa-2.63□□□□□ -2.83
snR50snR50 YSP2Q06681 1438 aa-2.64□□□□□ -2.83
snR50snR50 PAU7P39545 55 aa-2.64□□□□□ -2.83
snR50snR50 HUB1Q6Q546 73 aa-2.64□□□□□ -2.83
snR50snR50 YCL001W-BQ96VH2 84 aa-2.64□□□□□ -2.83
snR50snR50 THO2P53552 1597 aaKnown RBP-2.65□□□□□ -2.83
snR50snR50 TIM12P32830 109 aa-2.66□□□□□ -2.84
snR50snR50 YMR175W-AQ3E766 64 aa-2.66□□□□□ -2.84
snR50snR50 YGR035W-AQ45U48 73 aa-2.66□□□□□ -2.84
snR50snR50 TRA1P38811 3744 aa-2.67□□□□□ -2.84
snR50snR50 YER137CP40083 148 aaKnown RBP-2.67□□□□□ -2.84
snR50snR50 YGR121W-AQ3E816 71 aa-2.67□□□□□ -2.84
snR50snR50 DNF1P32660 1571 aa-2.68□□□□□ -2.84
snR50snR50 YMR105W-AQ8TGS8 64 aa-2.69□□□□□ -2.84
snR50snR50 RPL29P05747 59 aaPredicted RBP-2.7□□□□□ -2.84
snR50snR50 SWM2P40342 146 aa-2.71□□□□□ -2.84
snR50snR50 IRA1P18963 3092 aa-2.72□□□□□ -2.84
snR50snR50 YDR034C-AP0C289 58 aa-2.73□□□□□ -2.85
snR50snR50 IRA2P19158 3079 aa-2.74□□□□□ -2.85
snR50snR50 FKS3Q04952 1785 aa-2.74□□□□□ -2.85
snR50snR50 YLR157W-DP0CE99 70 aa-2.76□□□□□ -2.85
snR50snR50 MDS3P53094 1487 aa-2.77□□□□□ -2.85
snR50snR50 MMS22Q06164 1454 aa-2.77□□□□□ -2.85
snR50snR50 SNQ2P32568 1501 aaKnown RBP-2.78□□□□□ -2.85
snR50snR50 CWP2P43497 92 aa-2.81□□□□□ -2.86
snR50snR50 PDR12Q02785 1511 aa-2.82□□□□□ -2.86
snR50snR50 RPS30AP0CX33 63 aaKnown RBP-2.82□□□□□ -2.86
snR50snR50 RPS30BP0CX34 63 aaKnown RBP-2.82□□□□□ -2.86
snR50snR50 YOR316C-AQ3E806 69 aa-2.82□□□□□ -2.86
snR50snR50 ERI1P62651 68 aaKnown RBP-2.85□□□□□ -2.87
snR50snR50 PDR15Q04182 1529 aaKnown RBP-2.86□□□□□ -2.87
snR50snR50 YOL131WQ08270 108 aa-2.86□□□□□ -2.87
snR50snR50 YCR075W-AQ3E830 75 aa-2.86□□□□□ -2.87
snR50snR50 ZEO1Q08245 113 aa-2.87□□□□□ -2.87
snR50snR50 IQG1Q12280 1495 aa-2.89□□□□□ -2.87
snR50snR50 LTE1P07866 1435 aa-2.89□□□□□ -2.87
snR50snR50 YOR093CQ12275 1648 aa-2.9□□□□□ -2.87
snR50snR50 FLO1P32768 1537 aa-2.91□□□□□ -2.88
snR50snR50 RPO31P04051 1460 aa-2.91□□□□□ -2.88
snR50snR50 ARO1P08566 1588 aaKnown RBP-2.93□□□□□ -2.88
snR50snR50 TY1B-DR4Q07793 1604 aa-2.93□□□□□ -2.88
snR50snR50 DNF2Q12675 1612 aa-2.94□□□□□ -2.88
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms