RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W YIL059CP40520 121 aa1.63□□□□□ -2.15
SEC16YPL085W YIL163CP40448 117 aa1.63□□□□□ -2.15
SEC16YPL085W YIL102CP40488 101 aa1.63□□□□□ -2.15
SEC16YPL085W ATP20Q12233 115 aa1.63□□□□□ -2.15
SEC16YPL085W HFA1P32874 2273 aa1.63□□□□□ -2.15
SEC16YPL085W GCN1P33892 2672 aaKnown RBP1.63□□□□□ -2.15
SEC16YPL085W RPL38P49167 78 aaKnown RBP1.62□□□□□ -2.15
SEC16YPL085W IRC21Q04772 201 aa1.62□□□□□ -2.15
SEC16YPL085W YGR164WP53291 111 aa1.62□□□□□ -2.15
SEC16YPL085W YAR023CD6VPM8 179 aa1.62□□□□□ -2.15
SEC16YPL085W ECM29P38737 1868 aa1.62□□□□□ -2.15
SEC16YPL085W YOR011W-AQ3E807 68 aa1.62□□□□□ -2.15
SEC16YPL085W AIM4P38305 123 aaPredicted RBP1.61□□□□□ -2.15
SEC16YPL085W HUA1P40325 198 aa1.61□□□□□ -2.15
SEC16YPL085W YLL006W-AQ3E814 58 aa1.61□□□□□ -2.15
SEC16YPL085W KSH1Q8TGJ3 72 aa1.61□□□□□ -2.15
SEC16YPL085W DSE2P38844 325 aa1.61□□□□□ -2.15
SEC16YPL085W YOL014WQ08110 124 aa1.61□□□□□ -2.15
SEC16YPL085W BET1P22804 142 aa1.61□□□□□ -2.15
SEC16YPL085W YBR230W-AQ3E762 66 aa1.61□□□□□ -2.15
SEC16YPL085W YER078W-AQ3E7A2 54 aa1.61□□□□□ -2.15
SEC16YPL085W SMD1Q02260 146 aaPredicted RBP1.6□□□□□ -2.15
SEC16YPL085W BSC4P53841 131 aa1.6□□□□□ -2.15
SEC16YPL085W YPL038W-AQ3E7B4 63 aa1.6□□□□□ -2.15
SEC16YPL085W TDA8Q6B2U8 126 aa1.6□□□□□ -2.15
SEC16YPL085W RPL36BO14455 100 aaKnown RBP1.6□□□□□ -2.15
SEC16YPL085W RPL36AP05745 100 aaPredicted RBP1.6□□□□□ -2.15
SEC16YPL085W SMP1P38128 452 aa1.6□□□□□ -2.15
SEC16YPL085W YOR268CQ08734 132 aa1.6□□□□□ -2.15
SEC16YPL085W YFL065CP43539 102 aa1.59□□□□□ -2.15
SEC16YPL085W YPR153WQ06537 140 aa1.59□□□□□ -2.15
SEC16YPL085W YDR381C-AQ3E6R5 114 aa1.59□□□□□ -2.16
SEC16YPL085W YPR203WQ08994 102 aa1.58□□□□□ -2.16
SEC16YPL085W ATP15P21306 62 aa1.58□□□□□ -2.16
SEC16YPL085W YHR139C-AO13536 103 aa1.58□□□□□ -2.16
SEC16YPL085W YNR077CP53758 84 aa1.58□□□□□ -2.16
SEC16YPL085W MOT1P32333 1867 aa1.58□□□□□ -2.16
SEC16YPL085W YBR090CP38253 122 aa1.58□□□□□ -2.16
SEC16YPL085W YBR219CP38317 127 aa1.58□□□□□ -2.16
SEC16YPL085W TOM7P53507 60 aa1.58□□□□□ -2.16
SEC16YPL085W CUP1-1P0CX80 61 aa1.57□□□□□ -2.16
SEC16YPL085W CUP1-2P0CX81 61 aa1.57□□□□□ -2.16
SEC16YPL085W YCR001WP25347 104 aa1.57□□□□□ -2.16
SEC16YPL085W YOR316C-AQ3E806 69 aa1.57□□□□□ -2.16
SEC16YPL085W YCR043CP25361 127 aa1.57□□□□□ -2.16
SEC16YPL085W YHL005CP38752 130 aa1.57□□□□□ -2.16
SEC16YPL085W YPR013CQ12145 317 aa1.57□□□□□ -2.16
SEC16YPL085W YOR029WQ12243 111 aa1.57□□□□□ -2.16
SEC16YPL085W YMR230W-AQ3E7B5 62 aa1.57□□□□□ -2.16
SEC16YPL085W YJL009WP47078 108 aa1.56□□□□□ -2.16
SEC16YPL085W YLL066W-BQ8TGJ7 56 aa1.56□□□□□ -2.16
SEC16YPL085W TAR1Q8TGM6 124 aa1.56□□□□□ -2.16
SEC16YPL085W OST5Q92316 86 aa1.56□□□□□ -2.16
SEC16YPL085W YDR115WQ04598 105 aa1.56□□□□□ -2.16
SEC16YPL085W YDR034C-AP0C289 58 aa1.56□□□□□ -2.16
SEC16YPL085W YJL144WP47009 104 aa1.56□□□□□ -2.16
SEC16YPL085W MRX7P53869 86 aa1.56□□□□□ -2.16
SEC16YPL085W FMP27Q06179 2628 aa1.56□□□□□ -2.16
SEC16YPL085W MDN1Q12019 4910 aaKnown RBP1.55□□□□□ -2.16
SEC16YPL085W MMS2P53152 137 aa1.55□□□□□ -2.16
SEC16YPL085W YLR422WQ06409 1932 aa1.55□□□□□ -2.16
SEC16YPL085W SBH1P52870 82 aa1.55□□□□□ -2.16
SEC16YPL085W MRPS12P53732 153 aa1.55□□□□□ -2.16
SEC16YPL085W YLR162WQ06235 118 aa1.55□□□□□ -2.16
SEC16YPL085W LAA1P39526 2014 aa1.54□□□□□ -2.16
SEC16YPL085W YAL064WP39711 94 aa1.54□□□□□ -2.16
SEC16YPL085W YGR025WP53216 100 aa1.54□□□□□ -2.16
SEC16YPL085W SDH6Q3E785 79 aa1.54□□□□□ -2.16
SEC16YPL085W YJL133C-AQ3E7A3 74 aa1.54□□□□□ -2.16
SEC16YPL085W YNL208WP40159 199 aaKnown RBP1.54□□□□□ -2.16
SEC16YPL085W YOR072W-BQ3E832 53 aa1.54□□□□□ -2.16
SEC16YPL085W YNL198CP40166 100 aa1.53□□□□□ -2.16
SEC16YPL085W YML122CQ03207 126 aa1.53□□□□□ -2.16
SEC16YPL085W YCR095W-AQ3E787 52 aa1.53□□□□□ -2.17
SEC16YPL085W YHR213W-BQ8TGK1 99 aa1.53□□□□□ -2.17
SEC16YPL085W COX8P04039 78 aa1.52□□□□□ -2.17
SEC16YPL085W YNL122CP53921 115 aaPredicted RBP1.52□□□□□ -2.17
SEC16YPL085W YLR285C-AQ3E771 56 aa1.52□□□□□ -2.17
SEC16YPL085W YAR064WP39563 99 aa1.52□□□□□ -2.17
SEC16YPL085W UBR2Q07963 1872 aa1.52□□□□□ -2.17
SEC16YPL085W YNL277W-AQ3E7Z0 62 aa1.51□□□□□ -2.17
SEC16YPL085W YOL013W-AP0C272 63 aaPredicted RBP1.51□□□□□ -2.17
SEC16YPL085W FYV12Q08559 129 aa1.51□□□□□ -2.17
SEC16YPL085W YBL081WP38180 368 aaKnown RBP1.5□□□□□ -2.17
SEC16YPL085W YFL067WP43537 175 aa1.5□□□□□ -2.17
SEC16YPL085W BPH1P25356 2167 aa1.5□□□□□ -2.17
SEC16YPL085W YEL045CP32616 141 aa1.5□□□□□ -2.17
SEC16YPL085W RPS28BP0C0X0 67 aaKnown RBP1.49□□□□□ -2.17
SEC16YPL085W YDR119W-AQ2V2P9 66 aa1.49□□□□□ -2.17
SEC16YPL085W RPS28AQ3E7X9 67 aaPredicted RBP1.49□□□□□ -2.17
SEC16YPL085W AUA1P32450 94 aa1.49□□□□□ -2.17
SEC16YPL085W CDC39P25655 2108 aaKnown RBP1.49□□□□□ -2.17
SEC16YPL085W FAS1P07149 2051 aaKnown RBP1.49□□□□□ -2.17
SEC16YPL085W YFR009W-AP0C5M9 85 aa1.49□□□□□ -2.17
SEC16YPL085W YHR125WP38831 101 aa1.49□□□□□ -2.17
SEC16YPL085W RSM18P40033 138 aa1.49□□□□□ -2.17
SEC16YPL085W YBR201C-AQ2V2Q3 67 aa1.49□□□□□ -2.17
SEC16YPL085W YGR146C-AQ8TGT9 53 aa1.49□□□□□ -2.17
SEC16YPL085W YER187WP40102 141 aa1.48□□□□□ -2.17
SEC16YPL085W YIL156W-BQ2V2P4 73 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms