RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C YPR153WQ06537 140 aa3.53□□□□□ -1.84
NUP116YMR047C YAL065CO13511 128 aa3.53□□□□□ -1.84
NUP116YMR047C YOR034C-AQ3E735 80 aa3.53□□□□□ -1.84
NUP116YMR047C MIG3P39943 394 aa3.52□□□□□ -1.85
NUP116YMR047C YER188C-AP0C0V2 99 aa3.52□□□□□ -1.85
NUP116YMR047C OST5Q92316 86 aa3.52□□□□□ -1.85
NUP116YMR047C YMR141CP40211 102 aa3.52□□□□□ -1.85
NUP116YMR047C YIL156W-BQ2V2P4 73 aa3.52□□□□□ -1.85
NUP116YMR047C NOP10Q6Q547 58 aaPredicted RBP3.52□□□□□ -1.85
NUP116YMR047C DCV1P43595 202 aa3.51□□□□□ -1.85
NUP116YMR047C YOR314WQ12506 109 aa3.51□□□□□ -1.85
NUP116YMR047C ATP15P21306 62 aa3.5□□□□□ -1.85
NUP116YMR047C YHR022CP38763 256 aa3.5□□□□□ -1.85
NUP116YMR047C SGF11Q03067 99 aa3.5□□□□□ -1.85
NUP116YMR047C KRE9P39005 276 aa3.5□□□□□ -1.85
NUP116YMR047C YGR240C-AQ3E786 66 aa3.5□□□□□ -1.85
NUP116YMR047C YOR020W-AQ3E824 90 aa3.5□□□□□ -1.85
NUP116YMR047C YHL005CP38752 130 aa3.49□□□□□ -1.85
NUP116YMR047C PAU7P39545 55 aa3.49□□□□□ -1.85
NUP116YMR047C YOL014WQ08110 124 aa3.49□□□□□ -1.85
NUP116YMR047C ATP19P81451 68 aa3.49□□□□□ -1.85
NUP116YMR047C LIP1Q03579 150 aa3.49□□□□□ -1.85
NUP116YMR047C YLR342W-AQ3E810 57 aa3.49□□□□□ -1.85
NUP116YMR047C RGM1Q00453 211 aa3.48□□□□□ -1.85
NUP116YMR047C QCR10P37299 77 aa3.48□□□□□ -1.85
NUP116YMR047C YLR194CQ05777 254 aa3.48□□□□□ -1.85
NUP116YMR047C FIT2Q08906 153 aa3.47□□□□□ -1.85
NUP116YMR047C COA3Q3E7B2 85 aa3.47□□□□□ -1.85
NUP116YMR047C RPS30AP0CX33 63 aaKnown RBP3.47□□□□□ -1.85
NUP116YMR047C RPS30BP0CX34 63 aaKnown RBP3.47□□□□□ -1.85
NUP116YMR047C IRC21Q04772 201 aa3.47□□□□□ -1.85
NUP116YMR047C MPC3P53311 146 aa3.47□□□□□ -1.85
NUP116YMR047C RDS3Q06835 107 aaPredicted RBP3.47□□□□□ -1.85
NUP116YMR047C EDC2P40023 145 aaPredicted RBP3.46□□□□□ -1.86
NUP116YMR047C DAD4P69851 72 aa3.45□□□□□ -1.86
NUP116YMR047C YDR010CQ12426 110 aa3.45□□□□□ -1.86
NUP116YMR047C RPL38P49167 78 aaKnown RBP3.45□□□□□ -1.86
NUP116YMR047C SPG1P50088 95 aa3.45□□□□□ -1.86
NUP116YMR047C SOM1Q05676 74 aa3.45□□□□□ -1.86
NUP116YMR047C MSA2P36157 363 aa3.44□□□□□ -1.86
NUP116YMR047C YDL241WQ07738 123 aa3.44□□□□□ -1.86
NUP116YMR047C YAR023CD6VPM8 179 aa3.43□□□□□ -1.86
NUP116YMR047C COX23P38824 151 aa3.43□□□□□ -1.86
NUP116YMR047C ECM19Q06011 112 aa3.43□□□□□ -1.86
NUP116YMR047C YOL166W-AQ8TGJ1 51 aa3.43□□□□□ -1.86
NUP116YMR047C YOR011W-AQ3E807 68 aa3.43□□□□□ -1.86
NUP116YMR047C YPR010C-AA5Z2X5 72 aa3.42□□□□□ -1.86
NUP116YMR047C SHU1P38751 150 aa3.42□□□□□ -1.86
NUP116YMR047C MRPS12P53732 153 aa3.41□□□□□ -1.86
NUP116YMR047C MGR2Q02889 113 aa3.41□□□□□ -1.86
NUP116YMR047C YGL149WP53116 101 aa3.4□□□□□ -1.87
NUP116YMR047C RTC6O14464 93 aa3.39□□□□□ -1.87
NUP116YMR047C RPL36BO14455 100 aaKnown RBP3.39□□□□□ -1.87
NUP116YMR047C RPL36AP05745 100 aaPredicted RBP3.39□□□□□ -1.87
NUP116YMR047C YKL065W-AQ2V2P2 73 aa3.38□□□□□ -1.87
NUP116YMR047C GIS2P53849 153 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
NUP116YMR047C YBR200W-AQ3E755 54 aa3.37□□□□□ -1.87
NUP116YMR047C YCR095W-AQ3E787 52 aa3.37□□□□□ -1.87
NUP116YMR047C YBL008W-AQ3E821 79 aa3.37□□□□□ -1.87
NUP116YMR047C YER175W-AQ8TGU4 54 aa3.37□□□□□ -1.87
NUP116YMR047C YJR107C-AP0CT86 78 aa3.36□□□□□ -1.87
NUP116YMR047C RPL33AP05744 107 aaKnown RBP3.36□□□□□ -1.87
NUP116YMR047C ARC15P40518 154 aaRIP-Chip data3.36□□□□□ -1.87not detected
NUP116YMR047C RPL33BP41056 107 aaKnown RBP3.36□□□□□ -1.87
NUP116YMR047C YNL042W-BQ3E7Z2 85 aa3.36□□□□□ -1.87
NUP116YMR047C YIL102CP40488 101 aa3.35□□□□□ -1.87
NUP116YMR047C YGR025WP53216 100 aa3.35□□□□□ -1.87
NUP116YMR047C TOS6P48560 102 aa3.35□□□□□ -1.87
NUP116YMR047C YLL066W-BQ8TGJ7 56 aa3.34□□□□□ -1.87
NUP116YMR047C URM1P40554 99 aaPredicted RBP3.34□□□□□ -1.88
NUP116YMR047C YJR146WP47174 117 aa3.34□□□□□ -1.88
NUP116YMR047C MRP10O75012 95 aa3.33□□□□□ -1.88
NUP116YMR047C YDR182W-AQ3E796 67 aa3.33□□□□□ -1.88
NUP116YMR047C YMR122W-AQ3E842 84 aa3.33□□□□□ -1.88
NUP116YMR047C YCR001WP25347 104 aa3.32□□□□□ -1.88
NUP116YMR047C YOR008C-AQ3E7B9 74 aa3.32□□□□□ -1.88
NUP116YMR047C YLR236CA0A023PZG4 107 aa3.32□□□□□ -1.88
NUP116YMR047C IGD1P43598 195 aa3.32□□□□□ -1.88
NUP116YMR047C YER078W-AQ3E7A2 54 aa3.32□□□□□ -1.88
NUP116YMR047C MRX7P53869 86 aa3.32□□□□□ -1.88
NUP116YMR047C YCR043CP25361 127 aa3.3□□□□□ -1.88
NUP116YMR047C SNA2P56508 79 aa3.3□□□□□ -1.88
NUP116YMR047C YFR009W-AP0C5M9 85 aa3.29□□□□□ -1.88
NUP116YMR047C PMP3P87284 55 aa3.29□□□□□ -1.88
NUP116YMR047C LCL2Q08045 131 aa3.29□□□□□ -1.88
NUP116YMR047C ATP18P81450 59 aa3.28□□□□□ -1.88
NUP116YMR047C CMC4Q3E7A9 73 aa3.28□□□□□ -1.88
NUP116YMR047C QCR8P08525 94 aa3.27□□□□□ -1.89
NUP116YMR047C AQY2P0CD90 149 aa3.27□□□□□ -1.89
NUP116YMR047C YBR219CP38317 127 aa3.27□□□□□ -1.89
NUP116YMR047C BSC4P53841 131 aa3.27□□□□□ -1.89
NUP116YMR047C YOL085CQ99345 113 aa3.27□□□□□ -1.89
NUP116YMR047C YDR115WQ04598 105 aa3.27□□□□□ -1.89
NUP116YMR047C YJL197C-AP0C5P0 93 aa3.25□□□□□ -1.89
NUP116YMR047C YLR157W-DP0CE99 70 aa3.24□□□□□ -1.89
NUP116YMR047C RPC10P40422 70 aa3.24□□□□□ -1.89
NUP116YMR047C YEL008WP40001 126 aa3.23□□□□□ -1.89
NUP116YMR047C YMR001C-AQ8TGS9 76 aa3.22□□□□□ -1.89
NUP116YMR047C YNL122CP53921 115 aaPredicted RBP3.21□□□□□ -1.9
NUP116YMR047C LCL1Q02786 101 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms