RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C HUA1P40325 198 aa2.84□□□□□ -1.95
SRP40YKR092C YMR244WQ04018 355 aa2.84□□□□□ -1.95
SRP40YKR092C YPR013CQ12145 317 aa2.84□□□□□ -1.95
SRP40YKR092C HUB1Q6Q546 73 aa2.84□□□□□ -1.95
SRP40YKR092C MRPL38P35996 138 aaPredicted RBP2.83□□□□□ -1.96
SRP40YKR092C IGD1P43598 195 aa2.83□□□□□ -1.96
SRP40YKR092C ECM19Q06011 112 aa2.83□□□□□ -1.96
SRP40YKR092C SEC16P48415 2195 aaKnown RBP2.83□□□□□ -1.96
SRP40YKR092C VPS13Q07878 3144 aa2.82□□□□□ -1.96
SRP40YKR092C RPS30AP0CX33 63 aaKnown RBP2.82□□□□□ -1.96
SRP40YKR092C RPS30BP0CX34 63 aaKnown RBP2.82□□□□□ -1.96
SRP40YKR092C SIP18P50263 79 aa2.82□□□□□ -1.96
SRP40YKR092C DAD4P69851 72 aa2.82□□□□□ -1.96
SRP40YKR092C YDR114CQ04597 100 aa2.82□□□□□ -1.96
SRP40YKR092C YDR115WQ04598 105 aa2.82□□□□□ -1.96
SRP40YKR092C BRR2P32639 2163 aaKnown RBP2.82□□□□□ -1.96
SRP40YKR092C ACC1Q00955 2233 aaKnown RBP2.81□□□□□ -1.96
SRP40YKR092C YNR077CP53758 84 aa2.81□□□□□ -1.96
SRP40YKR092C NOP10Q6Q547 58 aaPredicted RBP2.81□□□□□ -1.96
SRP40YKR092C YLR236CA0A023PZG4 107 aa2.8□□□□□ -1.96
SRP40YKR092C YKR032WP36127 104 aa2.8□□□□□ -1.96
SRP40YKR092C YBR027CP38220 110 aa2.8□□□□□ -1.96
SRP40YKR092C YMR141CP40211 102 aa2.8□□□□□ -1.96
SRP40YKR092C EDC1P53080 175 aaPredicted RBP2.8□□□□□ -1.96
SRP40YKR092C YIL156W-BQ2V2P4 73 aa2.8□□□□□ -1.96
SRP40YKR092C YLR342W-AQ3E810 57 aa2.8□□□□□ -1.96
SRP40YKR092C BEM2P39960 2167 aaKnown RBP2.79□□□□□ -1.96
SRP40YKR092C YEL014CP39999 101 aa2.79□□□□□ -1.96
SRP40YKR092C YHR032W-AP0C5N6 59 aa2.78□□□□□ -1.96
SRP40YKR092C YBR219CP38317 127 aa2.78□□□□□ -1.96
SRP40YKR092C RPL33BP41056 107 aaKnown RBP2.78□□□□□ -1.96
SRP40YKR092C MGR2Q02889 113 aa2.78□□□□□ -1.96
SRP40YKR092C YMR105W-AQ8TGS8 64 aa2.78□□□□□ -1.96
SRP40YKR092C RPL39P04650 51 aa2.77□□□□□ -1.97
SRP40YKR092C YNL042W-BQ3E7Z2 85 aa2.77□□□□□ -1.97
SRP40YKR092C YCR001WP25347 104 aa2.76□□□□□ -1.97
SRP40YKR092C TOS6P48560 102 aa2.76□□□□□ -1.97
SRP40YKR092C ATP17Q06405 101 aa2.76□□□□□ -1.97
SRP40YKR092C YOR034C-AQ3E735 80 aa2.76□□□□□ -1.97
SRP40YKR092C YDR034W-BQ6Q5X2 51 aa2.76□□□□□ -1.97
SRP40YKR092C YOL166W-AQ8TGJ1 51 aa2.76□□□□□ -1.97
SRP40YKR092C CCW14O13547 238 aa2.75□□□□□ -1.97
SRP40YKR092C YDL022C-AP0C5L6 82 aa2.75□□□□□ -1.97
SRP40YKR092C YJL027CP47063 138 aaPredicted RBP2.75□□□□□ -1.97
SRP40YKR092C CMC4Q3E7A9 73 aa2.75□□□□□ -1.97
SRP40YKR092C YAL067W-AQ8TGK6 75 aa2.75□□□□□ -1.97
SRP40YKR092C BPH1P25356 2167 aa2.74□□□□□ -1.97
SRP40YKR092C COX8P04039 78 aa2.74□□□□□ -1.97
SRP40YKR092C YJR107C-AP0CT86 78 aa2.74□□□□□ -1.97
SRP40YKR092C YNL190WP53872 204 aa2.74□□□□□ -1.97
SRP40YKR092C SGF11Q03067 99 aa2.74□□□□□ -1.97
SRP40YKR092C CCW12Q12127 133 aa2.74□□□□□ -1.97
SRP40YKR092C RPS11AP0CX47 156 aaKnown RBP2.73□□□□□ -1.97
SRP40YKR092C RPS11BP0CX48 156 aaKnown RBP2.73□□□□□ -1.97
SRP40YKR092C SHU1P38751 150 aa2.73□□□□□ -1.97
SRP40YKR092C RPL38P49167 78 aaKnown RBP2.73□□□□□ -1.97
SRP40YKR092C YNL122CP53921 115 aaPredicted RBP2.73□□□□□ -1.97
SRP40YKR092C YOR008C-AQ3E7B9 74 aa2.73□□□□□ -1.97
SRP40YKR092C HFA1P32874 2273 aa2.73□□□□□ -1.97
SRP40YKR092C YPR195CQ06594 109 aa2.72□□□□□ -1.97
SRP40YKR092C YGL041C-BQ3E750 60 aa2.72□□□□□ -1.97
SRP40YKR092C SEN1Q00416 2231 aaKnown RBP2.72□□□□□ -1.97
SRP40YKR092C YIL102CP40488 101 aa2.71□□□□□ -1.98
SRP40YKR092C SDH6Q3E785 79 aa2.71□□□□□ -1.98
SRP40YKR092C YGL014C-AP0C5N1 53 aa2.7□□□□□ -1.98
SRP40YKR092C YOL085CQ99345 113 aa2.7□□□□□ -1.98
SRP40YKR092C FMP27Q06179 2628 aa2.7□□□□□ -1.98
SRP40YKR092C YLR157W-DP0CE99 70 aa2.69□□□□□ -1.98
SRP40YKR092C YJR146WP47174 117 aa2.69□□□□□ -1.98
SRP40YKR092C YMR001C-AQ8TGS9 76 aa2.69□□□□□ -1.98
SRP40YKR092C AQY2P0CD90 149 aa2.68□□□□□ -1.98
SRP40YKR092C ATP18P81450 59 aa2.68□□□□□ -1.98
SRP40YKR092C LCL2Q08045 131 aa2.68□□□□□ -1.98
SRP40YKR092C YBR200W-AQ3E755 54 aa2.68□□□□□ -1.98
SRP40YKR092C RPL33AP05744 107 aaKnown RBP2.67□□□□□ -1.98
SRP40YKR092C MRPS12P53732 153 aa2.67□□□□□ -1.98
SRP40YKR092C YOL097W-AQ3E7Y9 61 aa2.67□□□□□ -1.98
SRP40YKR092C YPR117WQ06116 2489 aa2.67□□□□□ -1.98
SRP40YKR092C YGR025WP53216 100 aa2.66□□□□□ -1.98
SRP40YKR092C YHR007C-AQ07074 71 aa2.66□□□□□ -1.98
SRP40YKR092C YNL146C-AQ3E7Z1 64 aa2.65□□□□□ -1.99
SRP40YKR092C CSF1Q12150 2958 aa2.64□□□□□ -1.99
SRP40YKR092C YOR011W-AQ3E807 68 aa2.64□□□□□ -1.99
SRP40YKR092C YEL008WP40001 126 aa2.63□□□□□ -1.99
SRP40YKR092C YDR210WQ03482 75 aa2.63□□□□□ -1.99
SRP40YKR092C VAM10Q08474 114 aa2.63□□□□□ -1.99
SRP40YKR092C YMR122W-AQ3E842 84 aa2.63□□□□□ -1.99
SRP40YKR092C YPR010C-AA5Z2X5 72 aa2.62□□□□□ -1.99
SRP40YKR092C YJL144WP47009 104 aa2.62□□□□□ -1.99
SRP40YKR092C YDL012CQ12489 107 aa2.62□□□□□ -1.99
SRP40YKR092C YBR201C-AQ2V2Q3 67 aa2.62□□□□□ -1.99
SRP40YKR092C YGR240C-AQ3E786 66 aa2.62□□□□□ -1.99
SRP40YKR092C PMP3P87284 55 aa2.6□□□□□ -1.99
SRP40YKR092C HOR7Q05827 59 aa2.6□□□□□ -1.99
SRP40YKR092C IRA2P19158 3079 aa2.6□□□□□ -1.99
SRP40YKR092C YBL039W-BP0C268 59 aa2.59□□□□□ -1.99
SRP40YKR092C YOL013W-AP0C272 63 aaPredicted RBP2.59□□□□□ -1.99
SRP40YKR092C YFR009W-AP0C5M9 85 aa2.59□□□□□ -1.99
SRP40YKR092C Q0032Q9ZZX7 96 aa2.59□□□□□ -1.99
SRP40YKR092C YLL006W-AQ3E814 58 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms