RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W YCL048W-AQ2V2Q2 79 aa2.88□□□□□ -1.95
UBP7YIL156W CCW12Q12127 133 aa2.87□□□□□ -1.95
UBP7YIL156W YCR095W-AQ3E787 52 aa2.87□□□□□ -1.95
UBP7YIL156W YCR085WP25650 117 aa2.87□□□□□ -1.95
UBP7YIL156W VPS55P47111 140 aa2.86□□□□□ -1.95
UBP7YIL156W ACC1Q00955 2233 aaKnown RBP2.86□□□□□ -1.95
UBP7YIL156W POL2P21951 2222 aaKnown RBP2.86□□□□□ -1.95
UBP7YIL156W YHL037CP38733 133 aa2.85□□□□□ -1.95
UBP7YIL156W YMR141CP40211 102 aa2.85□□□□□ -1.95
UBP7YIL156W IRC21Q04772 201 aa2.85□□□□□ -1.95
UBP7YIL156W YFL041W-AQ3E817 63 aa2.85□□□□□ -1.95
UBP7YIL156W SEC16P48415 2195 aaKnown RBP2.85□□□□□ -1.95
UBP7YIL156W RPL43AP0CX25 92 aaKnown RBP2.85□□□□□ -1.95
UBP7YIL156W RPL43BP0CX26 92 aa2.85□□□□□ -1.95
UBP7YIL156W ICS3P47034 131 aa2.85□□□□□ -1.95
UBP7YIL156W FPR2P32472 135 aa2.84□□□□□ -1.96
UBP7YIL156W YDR119W-AQ2V2P9 66 aa2.83□□□□□ -1.96
UBP7YIL156W YHR214C-DP0CX93 97 aa2.83□□□□□ -1.96
UBP7YIL156W YDL022C-AP0C5L6 82 aa2.83□□□□□ -1.96
UBP7YIL156W BRR2P32639 2163 aaKnown RBP2.82□□□□□ -1.96
UBP7YIL156W YBL071CP38185 102 aa2.82□□□□□ -1.96
UBP7YIL156W YGL041C-BQ3E750 60 aa2.82□□□□□ -1.96
UBP7YIL156W MGR2Q02889 113 aa2.81□□□□□ -1.96
UBP7YIL156W MRPS12P53732 153 aa2.81□□□□□ -1.96
UBP7YIL156W CCW14O13547 238 aa2.8□□□□□ -1.96
UBP7YIL156W YHR212W-AP0CX91 67 aa2.8□□□□□ -1.96
UBP7YIL156W MRPL38P35996 138 aaPredicted RBP2.8□□□□□ -1.96
UBP7YIL156W SNA2P56508 79 aa2.8□□□□□ -1.96
UBP7YIL156W COX12Q01519 83 aa2.8□□□□□ -1.96
UBP7YIL156W YIL086CP40503 102 aa2.8□□□□□ -1.96
UBP7YIL156W SPC1P46965 94 aa2.8□□□□□ -1.96
UBP7YIL156W LCL2Q08045 131 aa2.8□□□□□ -1.96
UBP7YIL156W TOS6P48560 102 aa2.79□□□□□ -1.96
UBP7YIL156W TOM1Q03280 3268 aa2.78□□□□□ -1.96
UBP7YIL156W AQY2P0CD90 149 aa2.78□□□□□ -1.96
UBP7YIL156W YNL122CP53921 115 aaPredicted RBP2.78□□□□□ -1.96
UBP7YIL156W YLR342W-AQ3E810 57 aa2.78□□□□□ -1.96
UBP7YIL156W AIM19P40502 157 aa2.78□□□□□ -1.97
UBP7YIL156W YNL190WP53872 204 aa2.78□□□□□ -1.97
UBP7YIL156W YGR240C-AQ3E786 66 aa2.78□□□□□ -1.97
UBP7YIL156W YIL046W-AQ3E7Z4 54 aa2.78□□□□□ -1.97
UBP7YIL156W TOM6P33448 61 aa2.77□□□□□ -1.97
UBP7YIL156W YJL009WP47078 108 aa2.77□□□□□ -1.97
UBP7YIL156W YPL038W-AQ3E7B4 63 aa2.77□□□□□ -1.97
UBP7YIL156W YOR008C-AQ3E7B9 74 aa2.77□□□□□ -1.97
UBP7YIL156W SPI1P40092 148 aa2.76□□□□□ -1.97
UBP7YIL156W YDR210WQ03482 75 aa2.76□□□□□ -1.97
UBP7YIL156W YDR381C-AQ3E6R5 114 aa2.76□□□□□ -1.97
UBP7YIL156W YPR117WQ06116 2489 aa2.75□□□□□ -1.97
UBP7YIL156W SIP18P50263 79 aa2.74□□□□□ -1.97
UBP7YIL156W YSY6P38374 65 aa2.74□□□□□ -1.97
UBP7YIL156W YMR105W-AQ8TGS8 64 aa2.74□□□□□ -1.97
UBP7YIL156W RPL39P04650 51 aa2.73□□□□□ -1.97
UBP7YIL156W MPC2P38857 129 aa2.73□□□□□ -1.97
UBP7YIL156W YOR032W-AQ8TGS1 66 aa2.72□□□□□ -1.97
UBP7YIL156W MRX7P53869 86 aa2.72□□□□□ -1.97
UBP7YIL156W BPH1P25356 2167 aa2.72□□□□□ -1.97
UBP7YIL156W SEN1Q00416 2231 aaKnown RBP2.71□□□□□ -1.98
UBP7YIL156W YGR025WP53216 100 aa2.7□□□□□ -1.98
UBP7YIL156W SHU1P38751 150 aa2.7□□□□□ -1.98
UBP7YIL156W YAR064WP39563 99 aa2.7□□□□□ -1.98
UBP7YIL156W YOR034C-AQ3E735 80 aa2.7□□□□□ -1.98
UBP7YIL156W NUM1Q00402 2748 aa2.69□□□□□ -1.98
UBP7YIL156W YBR200W-AQ3E755 54 aa2.68□□□□□ -1.98
UBP7YIL156W YCR001WP25347 104 aa2.68□□□□□ -1.98
UBP7YIL156W YOR072WQ08486 104 aa2.68□□□□□ -1.98
UBP7YIL156W VPS13Q07878 3144 aa2.67□□□□□ -1.98
UBP7YIL156W YLR255CO13574 117 aa2.67□□□□□ -1.98
UBP7YIL156W YOL013W-AP0C272 63 aaPredicted RBP2.67□□□□□ -1.98
UBP7YIL156W YJR107C-AP0CT86 78 aa2.66□□□□□ -1.98
UBP7YIL156W TEL1P38110 2787 aa2.66□□□□□ -1.98
UBP7YIL156W EDC1P53080 175 aaPredicted RBP2.66□□□□□ -1.98
UBP7YIL156W TAO3P40468 2376 aa2.66□□□□□ -1.98
UBP7YIL156W LCL1Q02786 101 aa2.66□□□□□ -1.98
UBP7YIL156W YDR246W-AQ3E763 66 aa2.66□□□□□ -1.98
UBP7YIL156W RPL38P49167 78 aaKnown RBP2.64□□□□□ -1.99
UBP7YIL156W ERI1P62651 68 aaKnown RBP2.64□□□□□ -1.99
UBP7YIL156W RPS11AP0CX47 156 aaKnown RBP2.64□□□□□ -1.99
UBP7YIL156W RPS11BP0CX48 156 aaKnown RBP2.64□□□□□ -1.99
UBP7YIL156W YOR011W-AQ3E807 68 aa2.64□□□□□ -1.99
UBP7YIL156W BSC4P53841 131 aa2.64□□□□□ -1.99
UBP7YIL156W ATP18P81450 59 aa2.62□□□□□ -1.99
UBP7YIL156W NOP10Q6Q547 58 aaPredicted RBP2.62□□□□□ -1.99
UBP7YIL156W YLL006W-AQ3E814 58 aa2.61□□□□□ -1.99
UBP7YIL156W MVB12P42939 101 aa2.61□□□□□ -1.99
UBP7YIL156W IRA2P19158 3079 aa2.61□□□□□ -1.99
UBP7YIL156W YOR314WQ12506 109 aa2.61□□□□□ -1.99
UBP7YIL156W HFA1P32874 2273 aa2.6□□□□□ -1.99
UBP7YIL156W YER188C-AP0C0V2 99 aa2.6□□□□□ -1.99
UBP7YIL156W PMP3P87284 55 aa2.6□□□□□ -1.99
UBP7YIL156W YAL065CO13511 128 aa2.59□□□□□ -1.99
UBP7YIL156W YDR010CQ12426 110 aa2.59□□□□□ -2
UBP7YIL156W YFR009W-AP0C5M9 85 aa2.58□□□□□ -2
UBP7YIL156W YIL102CP40488 101 aa2.57□□□□□ -2
UBP7YIL156W YKL065W-AQ2V2P2 73 aa2.57□□□□□ -2
UBP7YIL156W YDR182W-AQ3E796 67 aa2.57□□□□□ -2
UBP7YIL156W YGR121W-AQ3E816 71 aa2.56□□□□□ -2
UBP7YIL156W RPS30AP0CX33 63 aaKnown RBP2.56□□□□□ -2
UBP7YIL156W RPS30BP0CX34 63 aaKnown RBP2.56□□□□□ -2
UBP7YIL156W YOL166W-AQ8TGJ1 51 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms