RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W AQY2P0CD90 149 aa2.23□□□□□ -2.05
CAF130YGR134W YBL071CP38185 102 aa2.23□□□□□ -2.05
CAF130YGR134W PAU7P39545 55 aa2.23□□□□□ -2.05
CAF130YGR134W CCW12Q12127 133 aa2.23□□□□□ -2.05
CAF130YGR134W YMR175W-AQ3E766 64 aa2.23□□□□□ -2.05
CAF130YGR134W YIL102C-AQ2V2P5 75 aa2.23□□□□□ -2.05
CAF130YGR134W YLR342W-AQ3E810 57 aa2.23□□□□□ -2.05
CAF130YGR134W MRPL38P35996 138 aaPredicted RBP2.23□□□□□ -2.05
CAF130YGR134W MGR2Q02889 113 aa2.23□□□□□ -2.05
CAF130YGR134W MRPL31P14063 131 aaPredicted RBP2.22□□□□□ -2.05
CAF130YGR134W POR2P40478 281 aa2.22□□□□□ -2.05
CAF130YGR134W SNA2P56508 79 aa2.22□□□□□ -2.05
CAF130YGR134W MIX17Q03667 156 aa2.22□□□□□ -2.05
CAF130YGR134W YHR007C-AQ07074 71 aa2.22□□□□□ -2.05
CAF130YGR134W MRPS12P53732 153 aa2.21□□□□□ -2.06
CAF130YGR134W YJL197C-AP0C5P0 93 aa2.21□□□□□ -2.06
CAF130YGR134W YOL118CQ08259 102 aa2.21□□□□□ -2.06
CAF130YGR134W YOR192C-CQ3E736 78 aa2.2□□□□□ -2.06
CAF130YGR134W PFY1P07274 126 aa2.2□□□□□ -2.06
CAF130YGR134W TOS6P48560 102 aa2.19□□□□□ -2.06
CAF130YGR134W ATX1P38636 73 aa2.19□□□□□ -2.06
CAF130YGR134W YHL037CP38733 133 aa2.19□□□□□ -2.06
CAF130YGR134W CCW14O13547 238 aa2.19□□□□□ -2.06
CAF130YGR134W YNL198CP40166 100 aa2.19□□□□□ -2.06
CAF130YGR134W YDR119W-AQ2V2P9 66 aa2.19□□□□□ -2.06
CAF130YGR134W VPS55P47111 140 aa2.18□□□□□ -2.06
CAF130YGR134W SEC16P48415 2195 aaKnown RBP2.18□□□□□ -2.06
CAF130YGR134W SIP18P50263 79 aa2.18□□□□□ -2.06
CAF130YGR134W LCL2Q08045 131 aa2.18□□□□□ -2.06
CAF130YGR134W SED1Q01589 338 aa2.18□□□□□ -2.06
CAF130YGR134W TEL1P38110 2787 aa2.17□□□□□ -2.06
CAF130YGR134W YLR255CO13574 117 aa2.16□□□□□ -2.06
CAF130YGR134W COX12Q01519 83 aa2.16□□□□□ -2.06
CAF130YGR134W YDR010CQ12426 110 aa2.16□□□□□ -2.06
CAF130YGR134W YCL042WP25572 119 aa2.16□□□□□ -2.06
CAF130YGR134W YIL156W-BQ2V2P4 73 aa2.16□□□□□ -2.06
CAF130YGR134W PRM7Q12459 698 aa2.15□□□□□ -2.06
CAF130YGR134W YDR381C-AQ3E6R5 114 aa2.15□□□□□ -2.06
CAF130YGR134W YDR034W-BQ6Q5X2 51 aa2.15□□□□□ -2.06
CAF130YGR134W YMR105W-AQ8TGS8 64 aa2.15□□□□□ -2.07
CAF130YGR134W TOM7P53507 60 aa2.14□□□□□ -2.07
CAF130YGR134W YHR086W-AQ3E746 53 aa2.14□□□□□ -2.07
CAF130YGR134W YNL146C-AQ3E7Z1 64 aa2.13□□□□□ -2.07
CAF130YGR134W TOM6P33448 61 aa2.13□□□□□ -2.07
CAF130YGR134W IRC21Q04772 201 aa2.13□□□□□ -2.07
CAF130YGR134W FMP27Q06179 2628 aa2.12□□□□□ -2.07
CAF130YGR134W MPC2P38857 129 aa2.12□□□□□ -2.07
CAF130YGR134W YPL038W-AQ3E7B4 63 aa2.12□□□□□ -2.07
CAF130YGR134W YHL005CP38752 130 aa2.12□□□□□ -2.07
CAF130YGR134W SEN1Q00416 2231 aaKnown RBP2.12□□□□□ -2.07
CAF130YGR134W LCL1Q02786 101 aa2.11□□□□□ -2.07
CAF130YGR134W YFL041W-AQ3E817 63 aa2.11□□□□□ -2.07
CAF130YGR134W YOR008C-AQ3E7B9 74 aa2.1□□□□□ -2.07
CAF130YGR134W YMR141CP40211 102 aa2.09□□□□□ -2.07
CAF130YGR134W AIM19P40502 157 aa2.09□□□□□ -2.08
CAF130YGR134W YGL041C-BQ3E750 60 aa2.09□□□□□ -2.08
CAF130YGR134W NOP10Q6Q547 58 aaPredicted RBP2.09□□□□□ -2.08
CAF130YGR134W YER188C-AP0C0V2 99 aa2.09□□□□□ -2.08
CAF130YGR134W MRX7P53869 86 aa2.09□□□□□ -2.08
CAF130YGR134W YBR200W-AQ3E755 54 aa2.08□□□□□ -2.08
CAF130YGR134W RPL39P04650 51 aa2.08□□□□□ -2.08
CAF130YGR134W YDR210WQ03482 75 aa2.08□□□□□ -2.08
CAF130YGR134W YGR240C-AQ3E786 66 aa2.07□□□□□ -2.08
CAF130YGR134W YDL022C-AP0C5L6 82 aa2.07□□□□□ -2.08
CAF130YGR134W BSC4P53841 131 aa2.06□□□□□ -2.08
CAF130YGR134W YOL013W-AP0C272 63 aaPredicted RBP2.06□□□□□ -2.08
CAF130YGR134W SHU1P38751 150 aa2.06□□□□□ -2.08
CAF130YGR134W YOR034C-AQ3E735 80 aa2.06□□□□□ -2.08
CAF130YGR134W MVB12P42939 101 aa2.06□□□□□ -2.08
CAF130YGR134W YNL190WP53872 204 aa2.05□□□□□ -2.08
CAF130YGR134W RPL29P05747 59 aaPredicted RBP2.04□□□□□ -2.08
CAF130YGR134W GIS2P53849 153 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
CAF130YGR134W YHR212W-AP0CX91 67 aa2.04□□□□□ -2.08
CAF130YGR134W HUA1P40325 198 aa2.04□□□□□ -2.08
CAF130YGR134W YCL048W-AQ2V2Q2 79 aa2.03□□□□□ -2.08
CAF130YGR134W TOM1Q03280 3268 aa2.03□□□□□ -2.08
CAF130YGR134W RPS11AP0CX47 156 aaKnown RBP2.02□□□□□ -2.09
CAF130YGR134W RPS11BP0CX48 156 aaKnown RBP2.02□□□□□ -2.09
CAF130YGR134W ERI1P62651 68 aaKnown RBP2.02□□□□□ -2.09
CAF130YGR134W HOR7Q05827 59 aa2.02□□□□□ -2.09
CAF130YGR134W YBR201C-AQ2V2Q3 67 aa2.02□□□□□ -2.09
CAF130YGR134W YSY6P38374 65 aa2.02□□□□□ -2.09
CAF130YGR134W YGR121W-AQ3E816 71 aa2.02□□□□□ -2.09
CAF130YGR134W PMP3P87284 55 aa2.01□□□□□ -2.09
CAF130YGR134W YOR314WQ12506 109 aa2.01□□□□□ -2.09
CAF130YGR134W YPR010C-AA5Z2X5 72 aa2□□□□□ -2.09
CAF130YGR134W YMR122W-AQ3E842 84 aa2□□□□□ -2.09
CAF130YGR134W YAL065CO13511 128 aa1.99□□□□□ -2.09
CAF130YGR134W Q0032Q9ZZX7 96 aa1.99□□□□□ -2.09
CAF130YGR134W YDR182W-AQ3E796 67 aa1.99□□□□□ -2.09
CAF130YGR134W SGF11Q03067 99 aa1.98□□□□□ -2.09
CAF130YGR134W ATP18P81450 59 aa1.98□□□□□ -2.09
CAF130YGR134W YLL006W-AQ3E814 58 aa1.98□□□□□ -2.09
CAF130YGR134W RPC10P40422 70 aa1.97□□□□□ -2.09
CAF130YGR134W YDR246W-AQ3E763 66 aa1.97□□□□□ -2.09
CAF130YGR134W YJR107C-AP0CT86 78 aa1.96□□□□□ -2.09
CAF130YGR134W HHY1P39982 102 aa1.96□□□□□ -2.1
CAF130YGR134W YGR025WP53216 100 aa1.96□□□□□ -2.1
CAF130YGR134W Q0297Q9ZZV8 51 aa1.96□□□□□ -2.1
CAF130YGR134W YCR001WP25347 104 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms