RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	PAU13	P38725	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	RPB11	P38902	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU7	P39545	55 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU5	P43575	122 aa		0.79	□□□□□ -2.28
DOT6	YER088C	APS2	Q00381	147 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU10	Q03050	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU20	Q08322	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	YKL023C-A	Q2V2P3	75 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU9	Q3E770	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PFY1	P07274	126 aa		0.78	□□□□□ -2.28
DOT6	YER088C	YBL039W-B	P0C268	59 aa		0.78	□□□□□ -2.28
DOT6	YER088C	HMRA1	P0CY11	126 aa		0.78	□□□□□ -2.28
DOT6	YER088C	QCR10	P37299	77 aa		0.78	□□□□□ -2.28
DOT6	YER088C	YBR027C	P38220	110 aa		0.78	□□□□□ -2.28
DOT6	YER088C	RPS29A	P41057	56 aa	Known RBP	0.78	□□□□□ -2.28
DOT6	YER088C	SAE3	P89114	91 aa		0.78	□□□□□ -2.28
DOT6	YER088C	COX19	Q3E731	98 aa		0.78	□□□□□ -2.28
DOT6	YER088C	HAP3	P13434	144 aa		0.77	□□□□□ -2.29
DOT6	YER088C	GCV3	P39726	170 aa	Predicted RBP	0.77	□□□□□ -2.29
DOT6	YER088C	MVB12	P42939	101 aa		0.77	□□□□□ -2.29
DOT6	YER088C	YNL122C	P53921	115 aa	Predicted RBP	0.77	□□□□□ -2.29
DOT6	YER088C	YPR203W	Q08994	102 aa		0.77	□□□□□ -2.29
DOT6	YER088C	WIP1	Q2V2P8	89 aa		0.77	□□□□□ -2.29
DOT6	YER088C	FUN14	P18411	198 aa		0.77	□□□□□ -2.29
DOT6	YER088C	TOS6	P48560	102 aa		0.77	□□□□□ -2.29
DOT6	YER088C	YNL190W	P53872	204 aa		0.77	□□□□□ -2.29
DOT6	YER088C	MGR2	Q02889	113 aa		0.77	□□□□□ -2.29
DOT6	YER088C	YIR021W-A	Q3E739	70 aa		0.77	□□□□□ -2.29
DOT6	YER088C	YOR008C-A	Q3E7B9	74 aa		0.77	□□□□□ -2.29
DOT6	YER088C	YCL001W-B	Q96VH2	84 aa		0.77	□□□□□ -2.29
DOT6	YER088C	RPL29	P05747	59 aa	Predicted RBP	0.76	□□□□□ -2.29
DOT6	YER088C	HSP10	P38910	106 aa		0.76	□□□□□ -2.29
DOT6	YER088C	YAR064W	P39563	99 aa		0.76	□□□□□ -2.29
DOT6	YER088C	YIL102C	P40488	101 aa		0.76	□□□□□ -2.29
DOT6	YER088C	ERV14	P53173	138 aa		0.76	□□□□□ -2.29
DOT6	YER088C	DDR2	P89113	61 aa		0.76	□□□□□ -2.29
DOT6	YER088C	IRC21	Q04772	201 aa		0.76	□□□□□ -2.29
DOT6	YER088C	Q0017	Q9ZZX8	53 aa		0.76	□□□□□ -2.29
DOT6	YER088C	YGL014C-A	P0C5N1	53 aa		0.75	□□□□□ -2.29
DOT6	YER088C	UGX2	P32772	223 aa		0.75	□□□□□ -2.29
DOT6	YER088C	MRPL11	P36521	249 aa	Predicted RBP	0.75	□□□□□ -2.29
DOT6	YER088C	ATG8	P38182	117 aa	RIP-Chip data	0.75	□□□□□ -2.29	not detected
DOT6	YER088C	YHL005C	P38752	130 aa		0.75	□□□□□ -2.29
DOT6	YER088C	RPS29B	P41058	56 aa	Known RBP	0.75	□□□□□ -2.29
DOT6	YER088C	YOR072W	Q08486	104 aa		0.75	□□□□□ -2.29
DOT6	YER088C	COX7	P10174	60 aa		0.74	□□□□□ -2.29
DOT6	YER088C	YJL009W	P47078	108 aa		0.74	□□□□□ -2.29
DOT6	YER088C	YMR122C	Q03879	124 aa		0.74	□□□□□ -2.29
DOT6	YER088C	SEN15	Q04675	128 aa		0.74	□□□□□ -2.29
DOT6	YER088C	YLR296W	Q05898	108 aa		0.74	□□□□□ -2.29
DOT6	YER088C	YNL042W-B	Q3E7Z2	85 aa		0.74	□□□□□ -2.29
DOT6	YER088C	SHU1	P38751	150 aa		0.74	□□□□□ -2.29
DOT6	YER088C	ARL3	Q02804	198 aa		0.74	□□□□□ -2.29
DOT6	YER088C	YDR210W	Q03482	75 aa		0.74	□□□□□ -2.29
DOT6	YER088C	RPL36B	O14455	100 aa	Known RBP	0.73	□□□□□ -2.29
DOT6	YER088C	YOR304C-A	O14468	76 aa		0.73	□□□□□ -2.29
DOT6	YER088C	RPL36A	P05745	100 aa	Predicted RBP	0.73	□□□□□ -2.29
DOT6	YER088C	GSP1	P32835	219 aa	Known RBP	0.73	□□□□□ -2.29
DOT6	YER088C	YKL044W	P36092	106 aa		0.73	□□□□□ -2.29
DOT6	YER088C	RPL37A	P49166	88 aa	Known RBP	0.73	□□□□□ -2.29
DOT6	YER088C	YGL194C-A	Q2V2P6	80 aa		0.73	□□□□□ -2.29
DOT6	YER088C	HMRA2	P0CY13	119 aa		0.72	□□□□□ -2.29
DOT6	YER088C	YIL014C-A	Q02598	104 aa		0.72	□□□□□ -2.29
DOT6	YER088C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.72	□□□□□ -2.29
DOT6	YER088C	YLL006W-A	Q3E814	58 aa		0.72	□□□□□ -2.29
DOT6	YER088C	YOR376W-A	Q3E805	51 aa		0.72	□□□□□ -2.29
DOT6	YER088C	YNR034W-A	Q3E841	98 aa		0.72	□□□□□ -2.29
DOT6	YER088C	TDA2	P40045	126 aa		0.71	□□□□□ -2.3
DOT6	YER088C	BSC4	P53841	131 aa		0.71	□□□□□ -2.3
DOT6	YER088C	RUB1	Q03919	77 aa		0.71	□□□□□ -2.3
DOT6	YER088C	HPA2	Q06592	156 aa		0.71	□□□□□ -2.3
DOT6	YER088C	YBR230W-A	Q3E762	66 aa		0.71	□□□□□ -2.3
DOT6	YER088C	COA6	Q3E846	104 aa		0.71	□□□□□ -2.3
DOT6	YER088C	YJL127C-B	Q3E828	52 aa		0.71	□□□□□ -2.3
DOT6	YER088C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.7	□□□□□ -2.3
DOT6	YER088C	YJR128W	P47162	119 aa		0.7	□□□□□ -2.3
DOT6	YER088C	ICY1	Q04329	127 aa		0.7	□□□□□ -2.3
DOT6	YER088C	OST5	Q92316	86 aa		0.7	□□□□□ -2.3
DOT6	YER088C	YER187W	P40102	141 aa		0.69	□□□□□ -2.3
DOT6	YER088C	YGR164W	P53291	111 aa		0.69	□□□□□ -2.3
DOT6	YER088C	MRPS12	P53732	153 aa		0.69	□□□□□ -2.3
DOT6	YER088C	YPL261C	Q08976	102 aa		0.69	□□□□□ -2.3
DOT6	YER088C	VMA9	Q3E7B6	73 aa		0.69	□□□□□ -2.3
DOT6	YER088C	YER188C-A	P0C0V2	99 aa		0.69	□□□□□ -2.3
DOT6	YER088C	AIM4	P38305	123 aa	Predicted RBP	0.69	□□□□□ -2.3
DOT6	YER088C	GTT1	P40582	234 aa		0.69	□□□□□ -2.3
DOT6	YER088C	SNN1	P48232	102 aa		0.69	□□□□□ -2.3
DOT6	YER088C	PAU17	Q12370	124 aa		0.69	□□□□□ -2.3
DOT6	YER088C	YOL097W-A	Q3E7Y9	61 aa		0.69	□□□□□ -2.3
DOT6	YER088C	YLR157W-D	P0CE99	70 aa		0.68	□□□□□ -2.3
DOT6	YER088C	ICS3	P47034	131 aa		0.68	□□□□□ -2.3
DOT6	YER088C	YHR213W-B	Q8TGK1	99 aa		0.68	□□□□□ -2.3
DOT6	YER088C	YMR103C	Q04436	120 aa		0.67	□□□□□ -2.3
DOT6	YER088C	YHR130C	P38834	111 aa		0.67	□□□□□ -2.3
DOT6	YER088C	VMA21	P41806	77 aa		0.67	□□□□□ -2.3
DOT6	YER088C	YDL022C-A	P0C5L6	82 aa		0.66	□□□□□ -2.3
DOT6	YER088C	HUR1	P45820	110 aa		0.66	□□□□□ -2.3
DOT6	YER088C	FYV7	Q12247	151 aa		0.66	□□□□□ -2.3
DOT6	YER088C	YLR363W-A	Q3E747	85 aa		0.66	□□□□□ -2.3
DOT6	YER088C	YHR073W-A	P0C5N7	58 aa		0.65	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms