RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C XRN1P22147 1528 aaKnown RBP-4.83□□□□□ -3.18
SPG3YDR504C TY3B-GQ99315 1547 aa-4.83□□□□□ -3.18
SPG3YDR504C NKP2Q06162 153 aa-4.85□□□□□ -3.19
SPG3YDR504C YBR200W-AQ3E755 54 aa-4.85□□□□□ -3.19
SPG3YDR504C NOP10Q6Q547 58 aaPredicted RBP-4.86□□□□□ -3.19
SPG3YDR504C FIG2P25653 1609 aa-4.87□□□□□ -3.19
SPG3YDR504C RPS27BP38711 82 aa-4.88□□□□□ -3.19
SPG3YDR504C YDR042CQ03205 200 aa-4.88□□□□□ -3.19
SPG3YDR504C IRA1P18963 3092 aa-4.89□□□□□ -3.19
SPG3YDR504C HMRA1P0CY11 126 aa-4.89□□□□□ -3.19
SPG3YDR504C YGR146C-AQ8TGT9 53 aa-4.9□□□□□ -3.19
SPG3YDR504C YOR192C-CQ3E736 78 aa-4.91□□□□□ -3.2
SPG3YDR504C YLR099W-AQ3E798 87 aa-4.91□□□□□ -3.2
SPG3YDR504C KOG1P38873 1557 aa-4.93□□□□□ -3.2
SPG3YDR504C YOR011W-AQ3E807 68 aa-4.93□□□□□ -3.2
SPG3YDR504C YPL225WQ08971 146 aaKnown RBP-4.95□□□□□ -3.2
SPG3YDR504C APC1P53886 1748 aa-4.96□□□□□ -3.2
SPG3YDR504C YIL156W-BQ2V2P4 73 aa-4.96□□□□□ -3.2
SPG3YDR504C PDR10P51533 1564 aa-4.96□□□□□ -3.2
SPG3YDR504C PDR11P40550 1411 aa-4.97□□□□□ -3.21
SPG3YDR504C UTP10P42945 1769 aaKnown RBP-4.98□□□□□ -3.21
SPG3YDR504C QCR6P00127 147 aa-4.98□□□□□ -3.21
SPG3YDR504C MHF2Q3E829 80 aa-4.99□□□□□ -3.21
SPG3YDR504C TRA1P38811 3744 aa-5□□□□□ -3.21
SPG3YDR504C YBL039W-BP0C268 59 aa-5.01□□□□□ -3.21
SPG3YDR504C RRT15Q3E811 62 aa-5.02□□□□□ -3.21
SPG3YDR504C POL1P13382 1468 aa-5.04□□□□□ -3.22
SPG3YDR504C VMA7P39111 118 aa-5.04□□□□□ -3.22
SPG3YDR504C YMR090WQ04304 227 aaKnown RBP-5.04□□□□□ -3.22
SPG3YDR504C HAP1P0CE41 1502 aa-5.05□□□□□ -3.22
SPG3YDR504C WIP1Q2V2P8 89 aa-5.05□□□□□ -3.22
SPG3YDR504C YDL022C-AP0C5L6 82 aa-5.07□□□□□ -3.22
SPG3YDR504C YML054C-AQ3E809 52 aa-5.07□□□□□ -3.22
SPG3YDR504C IRA2P19158 3079 aa-5.08□□□□□ -3.22
SPG3YDR504C DYN2Q02647 92 aa-5.14□□□□□ -3.23
SPG3YDR504C YOR105WQ08504 108 aa-5.17□□□□□ -3.24
SPG3YDR504C YOR314WQ12506 109 aa-5.17□□□□□ -3.24
SPG3YDR504C KSH1Q8TGJ3 72 aa-5.17□□□□□ -3.24
SPG3YDR504C THO2P53552 1597 aaKnown RBP-5.2□□□□□ -3.24
SPG3YDR504C YER039C-AP0CD97 72 aa-5.21□□□□□ -3.24
SPG3YDR504C YBR230W-AQ3E762 66 aa-5.22□□□□□ -3.25
SPG3YDR504C SUS1Q6WNK7 96 aa-5.23□□□□□ -3.25
SPG3YDR504C YMR082CQ04276 118 aa-5.25□□□□□ -3.25
SPG3YDR504C CHD1P32657 1468 aa-5.26□□□□□ -3.25
SPG3YDR504C GEA1P47102 1408 aaPredicted RBP-5.28□□□□□ -3.25
SPG3YDR504C GDB1Q06625 1536 aa-5.28□□□□□ -3.26
SPG3YDR504C SPI1P40092 148 aa-5.29□□□□□ -3.26
SPG3YDR504C YMR105W-AQ8TGS8 64 aa-5.29□□□□□ -3.26
SPG3YDR504C SPP41P38904 1435 aa-5.3□□□□□ -3.26
SPG3YDR504C RPA190P10964 1664 aaKnown RBP-5.3□□□□□ -3.26
SPG3YDR504C MSL1P40567 111 aaPredicted RBP-5.31□□□□□ -3.26
SPG3YDR504C SIN3P22579 1536 aa-5.33□□□□□ -3.26
SPG3YDR504C YOR032W-AQ8TGS1 66 aa-5.34□□□□□ -3.26
SPG3YDR504C FKS3Q04952 1785 aa-5.38□□□□□ -3.27
SPG3YDR504C RPL29P05747 59 aaPredicted RBP-5.39□□□□□ -3.27
SPG3YDR504C YKL065W-AQ2V2P2 73 aa-5.39□□□□□ -3.27
SPG3YDR504C YGL194C-AQ2V2P6 80 aa-5.39□□□□□ -3.27
SPG3YDR504C DNF1P32660 1571 aa-5.4□□□□□ -3.27
SPG3YDR504C TIM12P32830 109 aa-5.4□□□□□ -3.27
SPG3YDR504C REV3P14284 1504 aa-5.43□□□□□ -3.28
SPG3YDR504C YSP2Q06681 1438 aa-5.46□□□□□ -3.28
SPG3YDR504C YDR034C-AP0C289 58 aa-5.46□□□□□ -3.28
SPG3YDR504C GEA2P39993 1459 aaKnown RBP-5.47□□□□□ -3.29
SPG3YDR504C SSS1P35179 80 aa-5.48□□□□□ -3.29
SPG3YDR504C SWR1Q05471 1514 aa-5.49□□□□□ -3.29
SPG3YDR504C QCR9P22289 66 aa-5.53□□□□□ -3.29
SPG3YDR504C HUB1Q6Q546 73 aa-5.54□□□□□ -3.3
SPG3YDR504C YPR145C-AQ2V2P0 78 aa-5.55□□□□□ -3.3
SPG3YDR504C YGR035W-AQ45U48 73 aa-5.55□□□□□ -3.3
SPG3YDR504C YOR304C-AO14468 76 aa-5.56□□□□□ -3.3
SPG3YDR504C SNQ2P32568 1501 aaKnown RBP-5.57□□□□□ -3.3
SPG3YDR504C PAU7P39545 55 aa-5.57□□□□□ -3.3
SPG3YDR504C YGR121W-AQ3E816 71 aa-5.57□□□□□ -3.3
SPG3YDR504C TSC11P40061 1430 aa-5.58□□□□□ -3.3
SPG3YDR504C YMR175W-AQ3E766 64 aa-5.59□□□□□ -3.3
SPG3YDR504C RPS12P48589 143 aaKnown RBP-5.6□□□□□ -3.31
SPG3YDR504C RPS30AP0CX33 63 aaKnown RBP-5.68□□□□□ -3.32
SPG3YDR504C RPS30BP0CX34 63 aaKnown RBP-5.68□□□□□ -3.32
SPG3YDR504C SWM2P40342 146 aa-5.69□□□□□ -3.32
SPG3YDR504C MDS3P53094 1487 aa-5.7□□□□□ -3.32
SPG3YDR504C YOR316C-AQ3E806 69 aa-5.7□□□□□ -3.32
SPG3YDR504C PDR12Q02785 1511 aa-5.7□□□□□ -3.32
SPG3YDR504C YLR157W-DP0CE99 70 aa-5.71□□□□□ -3.32
SPG3YDR504C YCL001W-BQ96VH2 84 aa-5.71□□□□□ -3.32
SPG3YDR504C FLO1P32768 1537 aa-5.74□□□□□ -3.33
SPG3YDR504C VPS13Q07878 3144 aa-5.75□□□□□ -3.33
SPG3YDR504C YOR093CQ12275 1648 aa-5.76□□□□□ -3.33
SPG3YDR504C PDR15Q04182 1529 aaKnown RBP-5.76□□□□□ -3.33
SPG3YDR504C DNF2Q12675 1612 aa-5.77□□□□□ -3.33
SPG3YDR504C YER137CP40083 148 aaKnown RBP-5.79□□□□□ -3.34
SPG3YDR504C TY1B-DR4Q07793 1604 aa-5.8□□□□□ -3.34
SPG3YDR504C YHR073W-AP0C5N7 58 aa-5.8□□□□□ -3.34
SPG3YDR504C MMS22Q06164 1454 aa-5.8□□□□□ -3.34
SPG3YDR504C ESP1Q03018 1630 aa-5.87□□□□□ -3.35
SPG3YDR504C RPO31P04051 1460 aa-5.87□□□□□ -3.35
SPG3YDR504C BCK1Q01389 1478 aa-5.89□□□□□ -3.35
SPG3YDR504C ERI1P62651 68 aaKnown RBP-5.89□□□□□ -3.35
SPG3YDR504C ARO1P08566 1588 aaKnown RBP-5.91□□□□□ -3.36
SPG3YDR504C PDR5P33302 1511 aaKnown RBP-5.92□□□□□ -3.36
SPG3YDR504C IQG1Q12280 1495 aa-5.92□□□□□ -3.36
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms