RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SLC39A12Q504Y0 691 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 RTP2Q5QGT7 225 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 FAM117BQ6P1L5 589 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 MFSD7Q6UXD7 560 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 RSPO2Q6UXX9 243 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-232ENST00000641947 POLNQ7Z5Q5 900 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 CEP57Q86XR8 500 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 CCDC50Q8IVM0 306 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 NAP1L3Q99457 506 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-232ENST00000641947 VN1R3Q9BXE9 311 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 HEMGNQ9BXL5 484 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 ULBP1Q9BZM6 244 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 ASNSD1Q9NWL6 643 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 ABHD14A-ACY1A0A1B0GW23 586 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 CAPN15O75808 1086 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 ZRANB2O95218 330 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 TRUB2O95900 331 aaKnown RBP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 GLI1P08151 1106 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 ACAP1Q15027 740 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 OTUD1Q5VV17 481 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 WDR93Q6P2C0 686 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 TTC27Q6P3X3 843 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 FAM172AQ8WUF8 416 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 ZNF689Q96CS4 500 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 LRRC4Q9HBW1 653 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 AMACRQ9UHK6 382 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 USP18Q9UMW8 372 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 SF3B1O75533 1304 aaKnown RBP eCLIP18.42■□□□□ 0.543e-6■■■■■ 100.2
PHGDH-232ENST00000641947 FYNP06241 537 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 CD48P09326 243 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 MYBL2P10244 700 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 CYP2F1P24903 491 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 SDC4P31431 198 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 PCK1P35558 622 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 ATXN1P54253 815 aaKnown RBP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 HDAC4P56524 1084 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 DAOAP59103 153 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 PITX1P78337 314 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 ARCQ7LC44 396 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 SIX6OS1Q8N1H7 587 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 OSBPL8Q9BZF1 889 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 ZNF446Q9NWS9 450 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 STIM2Q9P246 746 aa18.42■□□□□ 0.54
PHGDH-232ENST00000641947 R3HDM2Q9Y2K5 976 aaKnown RBP18.42■□□□□ 0.54
PHGDH-232ENST00000641947 PHF2O75151 1096 aa18.41■□□□□ 0.54
PHGDH-232ENST00000641947 KRT10P13645 584 aa18.41■□□□□ 0.54
PHGDH-232ENST00000641947 PTPN9P43378 593 aa18.41■□□□□ 0.54
PHGDH-232ENST00000641947 SPOCD1Q6ZMY3 1216 aa18.41■□□□□ 0.54
PHGDH-232ENST00000641947 GSPT2Q8IYD1 628 aaKnown RBP18.41■□□□□ 0.54
PHGDH-232ENST00000641947 DEFB106AQ8N104 65 aa18.41■□□□□ 0.54
PHGDH-232ENST00000641947 CENPIQ92674 756 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-232ENST00000641947 DDX23Q9BUQ8 820 aaKnown RBP18.41■□□□□ 0.54
PHGDH-232ENST00000641947 UBXN6Q9BZV1 441 aa18.41■□□□□ 0.54
PHGDH-232ENST00000641947 NGRNQ9NPE2 291 aaKnown RBP18.41■□□□□ 0.54
PHGDH-232ENST00000641947 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-232ENST00000641947 ESYT3A0FGR9 886 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 YJEFN3A6XGL0 299 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 E7ENQ6 273 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 TBC1D4O60343 1298 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 HSF2BPO75031 334 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 DAB1O75553 588 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 RNF8O76064 485 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 SEC31AO94979 1220 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 HEXIM1O94992 359 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 USP17L7P0C7H9 530 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CDKN2BP42772 138 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 TRADDQ15628 312 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 MAPRE1Q15691 268 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CLUL1Q15846 466 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CYP1B1Q16678 543 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CTXN3Q4LDR2 81 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 GLE1Q53GS7 698 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 EFHC1Q5JVL4 640 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 SPATA2LQ8IUW3 424 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 RCOR2Q8IZ40 523 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 TTC9BQ8N6N2 239 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 STKLD1Q8NE28 680 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 TBCBQ99426 244 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 DDX56Q9NY93 547 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 hCG_1818297A0A087WSY0 165 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 GOLGA6L10A0A0M3HER8 536 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 LRRD1A4D1F6 860 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 BHMG1C9JSJ3 638 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 TTI1O43156 1089 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 VNN2O95498 520 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 AMHP03971 560 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 KRT7P08729 469 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 MATKP42679 507 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 SMC1AQ14683 1233 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 HADHQ16836 314 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 SYPL2Q5VXT5 272 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 RNF168Q8IYW5 571 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 SCAMP5Q8TAC9 235 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 C1orf54Q8WWF1 131 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 ATG4AQ8WYN0 398 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 FAM149B1Q96BN6 582 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 RBM41Q96IZ5 413 aaKnown RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 PGLYRP2Q96PD5 576 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms