RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 MTMR3Q13615 1198 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 REXO1L1PQ8IX06 675 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 SLC35G2Q8TBE7 412 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 RFFLQ8WZ73 363 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 CNGB3Q9NQW8 809 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 MAN1C1Q9NR34 630 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 PLXNA3P51805 1871 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 MYO7AQ13402 2215 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 TRIOBPQ9H2D6 2365 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 SLC38A8A6NNN8 435 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 BUB1O43683 1085 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 GRAP2O75791 330 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 LRG1P02750 347 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 KRT3P12035 628 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 ARHGAP25P42331 645 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 EPHB3P54753 998 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 SLC6A3Q01959 620 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 PLD1Q13393 1074 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 DCUN1D2Q6PH85 259 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 OLFML1Q6UWY5 402 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 RHOT2Q8IXI1 618 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 MCRS1Q96EZ8 462 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 PIWIL1Q96J94 861 aaKnown RBP18.36■□□□□ 0.53
PHGDH-230ENST00000641927 TTYH1Q9H313 450 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-230ENST00000641927 FBXO44Q9H4M3 255 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 OSGEPQ9NPF4 335 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 METTL5Q9NRN9 209 aaKnown RBP18.36■□□□□ 0.53
PHGDH-230ENST00000641927 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 NCANO14594 1321 aa18.36■□□□□ 0.53
PHGDH-230ENST00000641927 GOLGA6L9A6NEM1 432 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 SOX1O00570 391 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-230ENST00000641927 RTN3O95197 1032 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-230ENST00000641927 USP46P62068 366 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 MRPS5P82675 430 aaKnown RBP18.35■□□□□ 0.53
PHGDH-230ENST00000641927 PPM1LQ5SGD2 360 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 PLEKHA7Q6IQ23 1121 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 ZNF564Q8TBZ8 553 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-230ENST00000641927 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 MCEEQ96PE7 176 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 IGFLR1Q9H665 355 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 UVRAGQ9P2Y5 699 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 HCFC2Q9Y5Z7 792 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 PATJQ8NI35 1801 aa18.35■□□□□ 0.53
PHGDH-230ENST00000641927 TMEM265A0A087WTH1 108 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 YWHAQP27348 245 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 GSCP56915 257 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-230ENST00000641927 DAOAP59103 153 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 GRIN2CQ14957 1233 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 TAF5Q15542 800 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 DUSP6Q16828 381 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 EFHC1Q5JVL4 640 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 ZNF697Q5TEC3 545 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 ELMSAN1Q6PJG2 1045 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 ZNF662Q6ZS27 426 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 SLC22A17Q8WUG5 538 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 GOLGA1Q92805 767 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 CEP295NLQ96MC4 621 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 FAM161BQ96MY7 647 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 PLEKHA4Q9H4M7 779 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 SALL4Q9UJQ4 1053 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 COG5Q9UP83 839 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 USP3Q9Y6I4 520 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 MYO9BQ13459 2157 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 A0A0A6YYK5 440 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-230ENST00000641927 SIGLEC16A6NMB1 481 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 BTNL10A8MVZ5 291 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 SART1O43290 800 aaKnown RBP18.34■□□□□ 0.53
PHGDH-230ENST00000641927 MOCS3O95396 460 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 CSH1P0DML2 217 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 CSH2P0DML3 217 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 RPL7AP62424 266 aaKnown RBP18.34■□□□□ 0.53
PHGDH-230ENST00000641927 ELMOD1Q8N336 334 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 FEZF2Q8TBJ5 459 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 FBXO32Q969P5 355 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 LRCH3Q96II8 777 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 NSUN3Q9H649 340 aaKnown RBP18.34■□□□□ 0.53
PHGDH-230ENST00000641927 KCND1Q9NSA2 647 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 EHD2Q9NZN4 543 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 DPP7Q9UHL4 492 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 ANAPC7Q9UJX3 599 aa18.34■□□□□ 0.53
PHGDH-230ENST00000641927 ATG2AQ2TAZ0 1938 aa18.33■□□□□ 0.53
PHGDH-230ENST00000641927 TCRBV5S1A1TA0A578 114 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 YJEFN3A6XGL0 299 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 E7ENQ6 273 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 C1RP00736 705 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.52
PHGDH-230ENST00000641927 RBM10P98175 930 aaKnown RBP18.33■□□□□ 0.52
PHGDH-230ENST00000641927 IFI16Q16666 785 aaKnown RBP18.33■□□□□ 0.52
PHGDH-230ENST00000641927 PM20D1Q6GTS8 502 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 DNAJB7Q7Z6W7 309 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-230ENST00000641927 ITIH5Q86UX2 942 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 EMC1Q8N766 993 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 JOSD2Q8TAC2 188 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 BTBD6Q96KE9 485 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 TRIM7Q9C029 511 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 SCML2Q9UQR0 700 aa18.33■□□□□ 0.52
PHGDH-230ENST00000641927 TMEM110-MUSTN1A8MSY1 372 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 CCL16O15467 120 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 HSF2BPO75031 334 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms