RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SIT1Q9Y3P8 196 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 PATJQ8NI35 1801 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 FAM170BA6NMN3 283 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 O00370 1275 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 COCHO43405 550 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 OLFM2O95897 454 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 PAEPP09466 180 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 ZDHHC11BP0C7U3 371 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 PON1P27169 355 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 KIF11P52732 1056 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 PDE4CQ08493 712 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 USP4Q13107 963 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 MTF1Q14872 753 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 EXOC3L4Q17RC7 722 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 VWA3BQ502W6 1294 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 TCP11X2Q5H9J9 407 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 PJA1Q8NG27 643 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 UBA3Q8TBC4 463 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 EBF3Q9H4W6 596 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 PNPLA8Q9NP80 782 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 LTB4R2Q9NPC1 389 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 HPS4Q9NQG7 708 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 OSER1Q9NX31 292 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 SCML2Q9UQR0 700 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 CPQQ9Y646 472 aa18.27■□□□□ 0.52
PHGDH-227ENST00000641811 WDFY4Q6ZS81 3184 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 LEFTY2O00292 366 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 SCAMP3O14828 347 aaKnown RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 MBL2P11226 248 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 KRT5P13647 590 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 GLULP15104 373 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 ARSAP15289 507 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 PFKLP17858 780 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 BRD2P25440 801 aaKnown RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 PDE6CP51160 858 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 KPNA1P52294 538 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 ZNF132P52740 706 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 SLC7A9P82251 487 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 PLCB2Q00722 1185 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 TYRO3Q06418 890 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 HECTD3Q5T447 861 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 SNX30Q5VWJ9 437 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 CC2D1AQ6P1N0 951 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 ZNF852Q6ZMS4 543 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 PIGZQ86VD9 579 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 CCDC105Q8IYK2 499 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 LINC00597Q9H2U6 94 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 NMUR1Q9HB89 426 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 SIX2Q9NPC8 291 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 FANCLQ9NW38 375 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 TAB2Q9NYJ8 693 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 DLGAP2Q9P1A6 1054 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 HESX1Q9UBX0 185 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 AJAP1Q9UKB5 411 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 KIAA1257Q9ULG3 409 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 NDRG2Q9UN36 371 aaKnown RBP18.26■□□□□ 0.51
PHGDH-227ENST00000641811 WNT6Q9Y6F9 365 aa18.26■□□□□ 0.51
PHGDH-227ENST00000641811 KIF26AQ9ULI4 1882 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-227ENST00000641811 A0A1W2PQH9 124 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 GTPBP10A4D1E9 387 aaKnown RBP18.25■□□□□ 0.51
PHGDH-227ENST00000641811 OTOL1A6NHN0 477 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-227ENST00000641811 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
PHGDH-227ENST00000641811 TBX18O95935 607 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 BCAT1P54687 386 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 MFAP3P55082 362 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 ARHGAP44Q17R89 818 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 CDKAL1Q5VV42 579 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 TXNDC11Q6PKC3 985 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 LCLAT1Q6UWP7 414 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 SCD5Q86SK9 330 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 FAM3CQ92520 227 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 UBXN6Q9BZV1 441 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 TLR8Q9NR97 1041 aaKnown RBP18.25■□□□□ 0.51
PHGDH-227ENST00000641811 DUS2Q9NX74 493 aaKnown RBP18.25■□□□□ 0.51
PHGDH-227ENST00000641811 APEX2Q9UBZ4 518 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 USP3Q9Y6I4 520 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 MUC6Q6W4X9 2439 aa18.25■□□□□ 0.51
PHGDH-227ENST00000641811 SPECC1L-ADORA2AF8WAN1 911 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 MAN2B1O00754 1011 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 TCF3P15923 654 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 EEF1GP26641 437 aaKnown RBP18.24■□□□□ 0.51
PHGDH-227ENST00000641811 SLC8A3P57103 927 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
PHGDH-227ENST00000641811 RUNX3Q13761 415 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 CNGA2Q16280 664 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 ITPRIPL2Q3MIP1 535 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 PKDCCQ504Y2 493 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 RAB41Q5JT25 222 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 DTWD2Q8NBA8 298 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 NDRG1Q92597 394 aaKnown RBP18.24■□□□□ 0.51
PHGDH-227ENST00000641811 ZFRQ96KR1 1074 aaKnown RBP18.24■□□□□ 0.51
PHGDH-227ENST00000641811 ACP6Q9NPH0 428 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 CFAP97Q9P2B7 532 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 NUDT5Q9UKK9 219 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.24■□□□□ 0.51
PHGDH-227ENST00000641811 MYO16Q9Y6X6 1858 aa18.24■□□□□ 0.51
PHGDH-227ENST00000641811 HELZP42694 1942 aaKnown RBP18.23■□□□□ 0.51
PHGDH-227ENST00000641811 BECN2A8MW95 431 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms