RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 CTCFP49711 727 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 BCAT1P54687 386 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 CA9Q16790 459 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 ERMARDQ5T6L9 678 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 ANKRD22Q5VYY1 191 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 C1orf228Q6PIY5 440 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 ARHGEF2Q92974 986 aaKnown RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 WNT8BQ93098 351 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 ZIC5Q96T25 663 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 HUS1O60921 280 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 TKTP29401 623 aaKnown RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 LILRA4P59901 499 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 MRPS6P82932 125 aaKnown RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 NBPF20Q3BBV1 942 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 TAF2Q6P1X5 1199 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 TAOK1Q7L7X3 1001 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 ZBED8Q8IZ13 594 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 CYP4X1Q8N118 509 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 STK32AQ8WU08 396 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 ATXN2LQ8WWM7 1075 aaKnown RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 CPT1BQ92523 772 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 SHOC2Q9UQ13 582 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 FARP1Q9Y4F1 1045 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
PHGDH-226ENST00000641756 ATP2C2O75185 946 aa18.66■□□□□ 0.58
PHGDH-226ENST00000641756 ATXN1P54253 815 aaKnown RBP18.66■□□□□ 0.58
PHGDH-226ENST00000641756 QPCTQ16769 361 aa18.66■□□□□ 0.58
PHGDH-226ENST00000641756 GDF6Q6KF10 455 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-226ENST00000641756 CEP128Q6ZU80 1094 aa18.66■□□□□ 0.58
PHGDH-226ENST00000641756 MTG1Q9BT17 334 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-226ENST00000641756 SNRNP25Q9BV90 132 aaKnown RBP18.66■□□□□ 0.58
PHGDH-226ENST00000641756 INTS9Q9NV88 658 aaKnown RBP18.66■□□□□ 0.58
PHGDH-226ENST00000641756 GABRQQ9UN88 632 aa18.66■□□□□ 0.58
PHGDH-226ENST00000641756 M0QZ92 97 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 IL4RP24394 825 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 ACAT1P24752 427 aaKnown RBP18.65■□□□□ 0.58
PHGDH-226ENST00000641756 HDAC4P56524 1084 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 SNX16P57768 344 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 PDIA2Q13087 525 aaKnown RBP18.65■□□□□ 0.58
PHGDH-226ENST00000641756 NOMO1Q15155 1222 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 FAM47CQ5HY64 1035 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 DARS2Q6PI48 645 aaKnown RBP18.65■□□□□ 0.58
PHGDH-226ENST00000641756 ANKMY2Q8IV38 441 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 CCDC13Q8IYE1 715 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 TRIB2Q92519 343 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 P3H4Q92791 437 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 CENPTQ96BT3 561 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 RNF157Q96PX1 679 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 ADAM33Q9BZ11 813 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 PCDH18Q9HCL0 1135 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 GTF2IRD1Q9UHL9 959 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 ST3GAL5Q9UNP4 418 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 DNAH12Q6ZR08 3092 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 TCRBV7S3A2A0A539 114 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 FAM155AB1AL88 458 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-226ENST00000641756 TCEA3O75764 348 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 MAP3K6O95382 1288 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 RARBP10826 455 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 INHBEP58166 350 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 ROR1Q01973 937 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 MTM1Q13496 603 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 STAT4Q14765 748 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 BOLA3Q53S33 107 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 CENPUQ71F23 418 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 ZDHHC17Q8IUH5 632 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 PPIL6Q8IXY8 311 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 PRMT1Q99873 361 aaKnown RBP18.65■□□□□ 0.58
PHGDH-226ENST00000641756 CCDC77Q9BR77 488 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 VPS37BQ9H9H4 285 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 NAALADL1Q9UQQ1 740 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 TRPV2Q9Y5S1 764 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 FAM169AQ9Y6X4 670 aa18.65■□□□□ 0.58
PHGDH-226ENST00000641756 A0A087WUV0 522 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-226ENST00000641756 MYO1CO00159 1063 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 CLDN5O00501 218 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-226ENST00000641756 ABHD2P08910 425 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 CYBAP13498 195 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 MLH1P40692 756 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
PHGDH-226ENST00000641756 GJA9P57773 515 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 TRIM32Q13049 653 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 TFDP2Q14188 446 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 PPP6R3Q5H9R7 873 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-226ENST00000641756 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 PCGF5Q86SE9 256 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 MAP7D3Q8IWC1 876 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 NAT8LQ8N9F0 302 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 MGARPQ8TDB4 240 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 NDRG1Q92597 394 aaKnown RBP18.64■□□□□ 0.57
PHGDH-226ENST00000641756 LPPQ93052 612 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 PPP1R10Q96QC0 940 aaKnown RBP18.64■□□□□ 0.57
PHGDH-226ENST00000641756 TSPAN18Q96SJ8 248 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 MAGEB5Q9BZ81 275 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 H7C0C1 242 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 CYB561D2O14569 222 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 ATP5DP30049 168 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 ATP5OP48047 213 aa18.64■□□□□ 0.57
PHGDH-226ENST00000641756 BASP1P80723 227 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms