RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ZNF516Q92618 1163 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 CEP63Q96MT8 703 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 PGLYRP2Q96PD5 576 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 ZMYND15Q9H091 742 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM9BQ9NQ34 198 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM74BQ9NUR3 256 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 SLC38A7Q9NVC3 462 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 INTS13Q9NVM9 706 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 HSFX1Q9UBD0 423 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 SIX4Q9UIU6 781 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 UBQLN1Q9UMX0 589 aaKnown RBP7.92□□□□□ -1.14
PHGDH-225ENST00000641720 FRMD4BQ9Y2L6 1034 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 DERAQ9Y315 318 aa7.92□□□□□ -1.14
PHGDH-225ENST00000641720 DOCK9Q9BZ29 2069 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 BOD1L1Q8NFC6 3051 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 MAPK13O15264 365 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 GJB3O75712 270 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 F11P03951 625 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM191BP0C7N4 346 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 EPB41P11171 864 aaKnown RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 CPB1P15086 417 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 CYP3A5P20815 502 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 POLR2BP30876 1174 aaKnown RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 GJA4P35212 333 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 GALK1P51570 392 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 CLDN10P78369 228 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 PPP3CAQ08209 521 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 MESP2Q0VG99 397 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 BFSP1Q12934 665 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 DMC1Q14565 340 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 HSP90AA4PQ58FG1 418 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 TDRD10Q5VZ19 366 aaKnown RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 C9orf57Q5W0N0 161 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 PDZD3Q86UT5 571 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 WDR49Q8IV35 697 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 AOPEPQ8N6M6 819 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 RPLP0P6Q8NHW5 317 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 TMC2Q8TDI7 906 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 USP13Q92995 863 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 ELMO3Q96BJ8 720 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 CNOT6LQ96LI5 555 aaKnown RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 FNBP1Q96RU3 617 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 LPIN3Q9BQK8 851 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 SRRTQ9BXP5 876 aaKnown RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 EBF3Q9H4W6 596 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 TASP1Q9H6P5 420 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 GKN1Q9NS71 199 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 DPP3Q9NY33 737 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 MBD1Q9UIS9 605 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 TIMM13Q9Y5L4 95 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-225ENST00000641720 PLXNA2O75051 1894 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 FLNCQ14315 2725 aa7.91□□□□□ -1.14
PHGDH-225ENST00000641720 COL27A1Q8IZC6 1860 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 COL5A1P20908 1838 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 SPAARA0A1B0GVQ0 90 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ANO9A1A5B4 782 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 PIRO00625 290 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 C1QL1O75973 258 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 VNN1O95497 513 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 APBB3O95704 486 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ITGB3P05106 788 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 TNNI1P19237 187 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 OPRD1P41143 372 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 GCLMP48507 274 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 VAMP7P51809 220 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ZXDBP98169 803 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 USP4Q13107 963 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 NCAPHQ15003 741 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ZNF77Q15935 545 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 CCDC40Q4G0X9 1142 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 DCAF17Q5H9S7 520 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 CDKAL1Q5VV42 579 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 DAB2IPQ5VWQ8 1189 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM92Q6UXU6 159 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 INTS8Q75QN2 995 aaKnown RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 TRAPPC11Q7Z392 1133 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 FILIP1Q7Z7B0 1213 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 NT5DC4Q86YG4 428 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 SFTPA1Q8IWL2 248 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 DHX40Q8IX18 779 aaKnown RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 YAF2Q8IY57 180 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 CMTM8Q8IZV2 173 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ELMOD1Q8N336 334 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 FRMD1Q8N878 549 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 MDGA1Q8NFP4 955 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ADAM32Q8TC27 787 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 SLC35C1Q96A29 364 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 TSPAN18Q96SJ8 248 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 HSD3B7Q9H2F3 369 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 SLITRK6Q9H5Y7 841 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 MMRN2Q9H8L6 949 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 SAMSN1Q9NSI8 373 aaKnown RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ARMCX3Q9UH62 379 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-225ENST00000641720 ITGA11Q9UKX5 1188 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 NFE2L3Q9Y4A8 694 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms