RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CDH5P33151 784 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PPP3CCP48454 512 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 GPR15P49685 360 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 GPC5P78333 572 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CAMK1Q14012 370 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PABPC1LQ4VXU2 614 aaKnown RBP13.62□□□□□ -0.23
PHGDH-218ENST00000641491 ARHGAP29Q52LW3 1261 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 BTBD8Q5XKL5 378 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PMF1Q6P1K2 205 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PAQR9Q6ZVX9 377 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PHF13Q86YI8 300 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-218ENST00000641491 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 GPR152Q8TDT2 470 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 RNF139Q8WU17 664 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PARVAQ9NVD7 372 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 TRPM5Q9NZQ8 1165 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CTTNBP2NLQ9P2B4 639 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CNOT8Q9UFF9 292 aaKnown RBP13.62□□□□□ -0.23
PHGDH-218ENST00000641491 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 HCN4Q9Y3Q4 1203 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 PCDHA13Q9Y5I0 950 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 ZNF197O14709 1029 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 KRT86O43790 486 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 USP17L7P0C7H9 530 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-218ENST00000641491 HOXB8P17481 243 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-218ENST00000641491 PTPN2P17706 415 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 FECHP22830 423 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 MMP8P22894 467 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 NOP2P46087 812 aaKnown RBP13.61□□□□□ -0.23
PHGDH-218ENST00000641491 PSEN1P49768 467 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
PHGDH-218ENST00000641491 MCOLN2Q8IZK6 566 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 TTC9BQ8N6N2 239 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 SLC35F5Q8WV83 523 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 IRGQQ8WZA9 623 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
PHGDH-218ENST00000641491 MRPS31Q92665 395 aaKnown RBP13.61□□□□□ -0.23
PHGDH-218ENST00000641491 PSMG2Q969U7 264 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 ZSWIM1Q9BR11 485 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 CORO1BQ9BR76 489 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 ULBP1Q9BZM6 244 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 INTUQ9ULD6 942 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
PHGDH-218ENST00000641491 GOLGA6L9A6NEM1 432 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 HSF2BPO75031 334 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 BEST1O76090 585 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 CFHP08603 1231 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 TMEM253P0C7T8 217 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 KRT3P12035 628 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 MYL4P12829 197 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
PHGDH-218ENST00000641491 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
PHGDH-218ENST00000641491 HYAL1Q12794 435 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-218ENST00000641491 PTPN20Q4JDL3 420 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 LILRA6Q6PI73 481 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 FAM183BPQ6ZVS7 135 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 RHOT2Q8IXI1 618 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 ACRBPQ8NEB7 543 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 SLC22A17Q8WUG5 538 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 OVCA2Q8WZ82 227 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 CALR3Q96L12 384 aaKnown RBP13.6□□□□□ -0.23
PHGDH-218ENST00000641491 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-218ENST00000641491 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 LRFN3Q9BTN0 628 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 PRKD2Q9BZL6 878 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
PHGDH-218ENST00000641491 TCF20Q9UGU0 1960 aaKnown RBP13.6□□□□□ -0.23
PHGDH-218ENST00000641491 VWA8A3KMH1 1905 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 TULP2O00295 520 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ERBB2P04626 1255 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 GLI1P08151 1106 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ATF6P18850 670 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 VAV2P52735 878 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 GALCP54803 685 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 YWHAGP61981 247 aaKnown RBP eCLIP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 CCZ1BP86790 482 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 SLC6A3Q01959 620 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ITIH3Q06033 890 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 MTF1Q14872 753 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 TMC5Q6UXY8 1006 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.232e-7■■■□□ 15.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms