RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 HCRTO43612 131 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.44
PHGDH-211ENST00000641213 AXLP30530 894 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ROR1Q01973 937 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 MAP2K5Q13163 448 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ITIH4Q14624 930 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 PDK2Q15119 407 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 SPRED3Q2MJR0 410 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 BOLA3Q53S33 107 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ARHGAP17Q68EM7 881 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 SCYL2Q6P3W7 929 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 DARS2Q6PI48 645 aaKnown RBP17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ARHGEF18Q6ZSZ5 1173 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ZC3H18Q86VM9 953 aaKnown RBP17.83■□□□□ 0.44
PHGDH-211ENST00000641213 SESTD1Q86VW0 696 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ANKS4BQ8N8V4 417 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 GDAP1Q8TB36 358 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 STK32AQ8WU08 396 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 FAM172AQ8WUF8 416 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 CCT6BQ92526 530 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 B3GNT5Q9BYG0 378 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 NGRNQ9NPE2 291 aaKnown RBP17.83■□□□□ 0.44
PHGDH-211ENST00000641213 GPATCH2LQ9NWQ4 482 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 ZMYND8Q9ULU4 1186 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-211ENST00000641213 A8MXQ7 604 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 E7ESA3 106 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 PIRO00625 290 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 TMEM63AO94886 807 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 ZNF865P0CJ78 1059 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-211ENST00000641213 IL4RP24394 825 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 SDC4P31431 198 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 STIP1P31948 543 aaKnown RBP17.82■□□□□ 0.44
PHGDH-211ENST00000641213 NRLP54845 237 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 SF3A3Q12874 501 aaKnown RBP eCLIP17.82■□□□□ 0.441e-9■■■■□ 22.2
PHGDH-211ENST00000641213 KRT81Q14533 505 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 SNX17Q15036 470 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 ANKRD20A8PQ5CZ79 823 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 ZC3H12AQ5D1E8 599 aaKnown RBP17.82■□□□□ 0.44
PHGDH-211ENST00000641213 MAP7D3Q8IWC1 876 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 TEKT4Q8WW24 435 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 NKIRAS1Q9NYS0 192 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 PIN4Q9Y237 131 aaKnown RBP17.82■□□□□ 0.44
PHGDH-211ENST00000641213 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
PHGDH-211ENST00000641213 ZNF638Q14966 1978 aaKnown RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 SMIM28A0A1B0GU29 152 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 SMAPO00193 183 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 DNM1LO00429 736 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PSEN2P49810 448 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 SNX16P57768 344 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PKN2Q16513 984 aaKnown RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 FBXO47Q5MNV8 452 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PYROXD1Q8WU10 500 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 KBTBD7Q8WVZ9 684 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 USP6NLQ92738 828 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 WDR83Q9BRX9 315 aaKnown RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 KDM4CQ9H3R0 1056 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PPCSQ9HAB8 311 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 FGFR1OP2Q9NVK5 253 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 KLK14Q9P0G3 267 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 XPO7Q9UIA9 1087 aaKnown RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 RABGEF1Q9UJ41 708 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 CCT8L1PA6NM43 557 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 HAS3O00219 553 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 TREHO43280 583 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 CD4P01730 458 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 FGFR1P11362 822 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 STX2P32856 288 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 BASP1P80723 227 aaKnown RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 ZNF200P98182 395 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 IRF5Q13568 498 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 LACTB2Q53H82 288 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 C1orf228Q6PIY5 440 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PPP1R21Q6ZMI0 780 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 ZDHHC17Q8IUH5 632 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PLD5Q8N7P1 536 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 C7orf31Q8N865 590 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 SNRNP25Q9BV90 132 aaKnown RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 ACTR5Q9H9F9 607 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-211ENST00000641213 PCDH18Q9HCL0 1135 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 SLC24A2Q9UI40 661 aa17.81■□□□□ 0.44
PHGDH-211ENST00000641213 FAM47DPA6NHR8 397 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 KPNA7A9QM74 516 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 SPTLC1O15269 473 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 SNX3O60493 162 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 OAS1P00973 400 aaKnown RBP17.8■□□□□ 0.44
PHGDH-211ENST00000641213 PDGFRBP09619 1106 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 CCDC130P13994 396 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 LMO2P25791 158 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 SSTR1P30872 391 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 RASA2Q15283 850 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 CA9Q16790 459 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 UBXN11Q5T124 520 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 CRYBG2Q8N1P7 616 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 PQLC3Q8N755 202 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 ATP11CQ8NB49 1132 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 FBXO36Q8NEA4 188 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 MAGEB18Q96M61 343 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms