RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 CYP4F11Q9HBI6 524 aa12.61□□□□□ -0.39
ERGIC3-220ENST00000640748 ZSCAN32Q9NX65 697 aa12.61□□□□□ -0.39
ERGIC3-220ENST00000640748 DUSP10Q9Y6W6 482 aa12.61□□□□□ -0.39
ERGIC3-220ENST00000640748 COL4A2P08572 1712 aa12.61□□□□□ -0.39
ERGIC3-220ENST00000640748 PDCD11Q14690 1871 aaKnown RBP12.61□□□□□ -0.39
ERGIC3-220ENST00000640748 SPTBN2O15020 2390 aa12.61□□□□□ -0.39
ERGIC3-220ENST00000640748 ANO9A1A5B4 782 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 CYP26A1O43174 497 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 CLSTN1O94985 981 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 MOCS3O95396 460 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 VNN2O95498 520 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 CXCL8P10145 99 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 ELF1P32519 619 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 PDE6CP51160 858 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 EPHA5P54756 1037 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 BPIFB4P59827 614 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 NOP14P78316 857 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 TFAMQ00059 246 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 ADCY1Q08828 1119 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 RSPO4Q2I0M5 234 aaPredicted RBP12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 CTXN3Q4LDR2 81 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 TPGS2Q68CL5 300 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 VITQ6UXI7 678 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 CD302Q8IX05 232 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 FAM84AQ96KN4 292 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 ASB7Q9H672 318 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 ZFP14Q9HCL3 533 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 SEPT11Q9NVA2 429 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 TUBGCP4Q9UGJ1 667 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 MRFAP1Q9Y605 127 aa12.6□□□□□ -0.39
ERGIC3-220ENST00000640748 LACTBL1A8MY62 500 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 H7C4K7 107 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 ARNTLO00327 626 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 DYNC1I1O14576 645 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 KRT5P13647 590 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 GJA1P17302 382 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 TWF1Q12792 350 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 CUL2Q13617 745 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 SGSM1Q2NKQ1 1148 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 SPOPLQ6IQ16 392 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 EFCAB13Q8IY85 973 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 MNS1Q8NEH6 495 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 BEST2Q8NFU1 509 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 OLIG1Q8TAK6 271 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 EPS8L1Q8TE68 723 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 SMARCD2Q92925 531 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 RSPRY1Q96DX4 576 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 PACSIN1Q9BY11 444 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 LRRC3Q9BY71 257 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 CHRDQ9H2X0 955 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 APOBEC3GQ9HC16 384 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 MRPS17Q9Y2R5 130 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 NUB1Q9Y5A7 615 aa12.59□□□□□ -0.39
ERGIC3-220ENST00000640748 A0A0A6YYK5 440 aaPredicted RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 ZNF197O14709 1029 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 NCAM2O15394 837 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 ASS1P00966 412 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 CST3P01034 146 aaPredicted RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 CYP11B1P15538 503 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 VIPR2P41587 438 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 GALCP54803 685 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 MYL6P60660 151 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 NOP9Q86U38 636 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 ZNF677Q86XU0 584 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 SLC20A1Q8WUM9 679 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 TAF4BQ92750 862 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 TRMT61BQ9BVS5 477 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 CRISPLD1Q9H336 500 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 TRPV4Q9HBA0 871 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 NOCTQ9UK39 431 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 NDRG2Q9UN36 371 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 JRKLQ9Y4A0 524 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 PCDHB4Q9Y5E5 795 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 CAPN6Q9Y6Q1 641 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 EPG5Q9HCE0 2579 aa12.58□□□□□ -0.4
ERGIC3-220ENST00000640748 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
ERGIC3-220ENST00000640748 M0QZQ0 153 aa12.57□□□□□ -0.4
ERGIC3-220ENST00000640748 MAN2B1O00754 1011 aa12.57□□□□□ -0.4
ERGIC3-220ENST00000640748 BUB1O43683 1085 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms