RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 RARAP10276 462 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 TCF7P36402 384 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 PTENP60484 403 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 OSTNP61366 133 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 TFAMQ00059 246 aaKnown RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 HERC3Q15034 1050 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 SCARA5Q6ZMJ2 495 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ARPINQ7Z6K5 226 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ZBTB8OSQ8IWT0 167 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 HIPK4Q8NE63 616 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 MDM1Q8TC05 714 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 AGBL1Q96MI9 1066 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF304Q9HCX3 659 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 VTA1Q9NP79 307 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ADA2Q9NZK5 511 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 PI4KBQ9UBF8 816 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 GLS2Q9UI32 602 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 BAIAP2Q9UQB8 552 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ZC3H13Q5T200 1668 aaKnown RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CEP170BQ9Y4F5 1589 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 FAM237AA0A1B0GTK4 181 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ISPDA4D126 451 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 DNAJB5O75953 348 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 TGDSO95455 350 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CDK9P50750 372 aaKnown RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 NEK5Q6P3R8 708 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 FOXP4Q8IVH2 680 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 MAP3K14Q99558 947 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 LACRTQ9GZZ8 138 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 EML4Q9HC35 981 aaKnown RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 GRID1Q9ULK0 1009 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 NR2E3Q9Y5X4 410 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ITGB3P05106 788 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CSF1RP07333 972 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 NPR1P16066 1061 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 NAMPTP43490 491 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ITGA1P56199 1179 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 QRICH1Q2TAL8 776 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 MTERF2Q49AM1 385 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 LVRNQ6Q4G3 990 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ADGRF4Q8IZF3 695 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 SUPT20HQ8NEM7 779 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 C1orf54Q8WWF1 131 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 FAM149B1Q96BN6 582 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 TPRKBQ9Y3C4 175 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 COL3A1P02461 1466 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ADGRB1O14514 1584 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 TYW5A2RUC4 315 aaKnown RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 FBP2O00757 339 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CCNKO75909 580 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 BBOX1O75936 387 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CALB1P05937 261 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 PDGFRBP09619 1106 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 VCPP55072 806 aaKnown RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 FOLH1Q04609 750 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 EPC2Q52LR7 807 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 C12orf60Q5U649 245 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 IYDQ6PHW0 289 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ZBTB49Q6ZSB9 765 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 VPS33BQ9H267 617 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 CCDC177Q9NQR7 707 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-227ENST00000640648 SMYD2Q9NRG4 433 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 PARVAQ9NVD7 372 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 AP3M1Q9Y2T2 418 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 ATP8B3O60423 1300 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SYNCRIPO60506 623 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SRP72O76094 671 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 YES1P07947 543 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 AKR1B1P15121 316 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 KLRC1P26715 233 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 RTP1P59025 263 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 COPZ1P61923 177 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF568Q3ZCX4 644 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 C1QTNF12Q5T7M4 302 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 MTDHQ86UE4 582 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM168Q9H0V1 697 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SSU72Q9NP77 194 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 AKAP10O43572 662 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TSC22D2O75157 780 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 FYNP06241 537 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 NAT1P18440 290 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TAP1Q03518 808 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 NAALADL2Q58DX5 795 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ABRAXAS1Q6UWZ7 409 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 NIM1KQ8IY84 436 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 RAB2BQ8WUD1 216 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SLC7A3Q8WY07 619 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms