RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ABCD1P33897 745 aa15.22■□□□□ 0.03
SCARB2-221ENST00000640341 PTPN11Q06124 597 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-221ENST00000640341 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
SCARB2-221ENST00000640341 ZNF518BQ9C0D4 1074 aa15.22■□□□□ 0.03
SCARB2-221ENST00000640341 ZC3H7BQ9UGR2 993 aaKnown RBP15.22■□□□□ 0.03
SCARB2-221ENST00000640341 CPSF3Q9UKF6 684 aaKnown RBP15.22■□□□□ 0.03
SCARB2-221ENST00000640341 APOC4-APOC2K7ER74 178 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 ZBED1O96006 694 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 PIGRP01833 764 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 APOC2P02655 101 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 EFNA5P52803 228 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 SLC8A3P57103 927 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 PARP6Q2NL67 630 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 GJC2Q5T442 439 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-221ENST00000640341 PPP1R2P3Q6NXS1 205 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 ZPBP2Q6X784 338 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 PPP1R14CQ8TAE6 165 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 STMN2Q93045 179 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 SRPK1Q96SB4 655 aaKnown RBP15.21■□□□□ 0.03
SCARB2-221ENST00000640341 MAGEB5Q9BZ81 275 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 NMUR2Q9GZQ4 415 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 ELOVL4Q9GZR5 314 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 PIM2Q9P1W9 311 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 MAGED2Q9UNF1 606 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-221ENST00000640341 BRWD3Q6RI45 1802 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 ARIH2O95376 493 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 HMGCRP04035 888 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 RFC5P40937 340 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 C1orf127Q8N9H9 656 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 PPP1R13LQ8WUF5 828 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 INPP5DQ92835 1189 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 FAM161BQ96MY7 647 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.21■□□□□ 0.03
SCARB2-221ENST00000640341 CEP350Q5VT06 3117 aa15.21■□□□□ 0.03
SCARB2-221ENST00000640341 CCDC22O60826 627 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 MAFO75444 373 aaPredicted RBP15.21■□□□□ 0.02
SCARB2-221ENST00000640341 SERPINB4P48594 390 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 CRADDP78560 199 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 AMHR2Q16671 573 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 JADE1Q6IE81 842 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 RINLQ6ZS11 566 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 C7orf31Q8N865 590 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 SHCBP1LQ9BZQ2 653 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.02
SCARB2-221ENST00000640341 SYNJ2BP-COX16A0A087WUM0 186 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 CAPN9O14815 690 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 ALDH18A1P54886 795 aaKnown RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 BCAR1P56945 870 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 NAIF1Q69YI7 327 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 MPZL3Q6UWV2 235 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 CLPTM1LQ96KA5 538 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 GGA3Q9NZ52 723 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 COX16Q9P0S2 106 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 I3L4J1 428 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 TRUB2O95900 331 aaKnown RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 CHI3L2Q15782 390 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 POLNQ7Z5Q5 900 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 FBXO16Q8IX29 292 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 SCUBE3Q8IX30 993 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 UBR7Q8N806 425 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 SLC4A11Q8NBS3 891 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 WDR60Q8WVS4 1066 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 NIFKQ9BYG3 293 aaKnown RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 CEP41Q9BYV8 373 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 ASNSD1Q9NWL6 643 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 BTBD7Q9P203 1132 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 SLC17A6Q9P2U8 582 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 SIX4Q9UIU6 781 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 FCHO1O14526 889 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 TM9SF1O15321 606 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 FAM189A1O60320 539 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 MCCD1P59942 119 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 THOC5Q13769 683 aaKnown RBP15.2■□□□□ 0.02
SCARB2-221ENST00000640341 DNAJC9Q8WXX5 260 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 NSL1Q96IY1 281 aa15.2■□□□□ 0.02
SCARB2-221ENST00000640341 B2RBV5 119 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 GPR25O00155 361 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 AP3M2P53677 418 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 ATXN1P54253 815 aaKnown RBP15.19■□□□□ 0.02
SCARB2-221ENST00000640341 MAB21L3Q8N8X9 362 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 TMEM176AQ96HP8 235 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 APOPT1Q96IL0 206 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 LPIN3Q9BQK8 851 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 BTBD10Q9BSF8 475 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 CDT1Q9H211 546 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 SOWAHBA6NEL2 793 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 KIF1CO43896 1103 aaKnown RBP15.19■□□□□ 0.02
SCARB2-221ENST00000640341 BAG2O95816 211 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 GRIA1P42261 906 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 RASA2Q15283 850 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 TSNAXIP1Q2TAA8 658 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 DALRD3Q5D0E6 543 aaKnown RBP15.19■□□□□ 0.02
SCARB2-221ENST00000640341 IER5Q5VY09 327 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms