RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 F8VZ95 297 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 PIRO00625 290 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 PPEF2O14830 753 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 POMCP01189 267 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 ACRP10323 421 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 LRPAP1P30533 357 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 HNRNPH3P31942 346 aaKnown RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 SSR1P43307 286 aaKnown RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 MFAP3P55082 362 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 SKOR1P84550 965 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 GRIK3Q13003 919 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 CUL2Q13617 745 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 DRAP1Q14919 205 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 ARHGAP44Q17R89 818 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 C1orf228Q6PIY5 440 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 ENOSF1Q7L5Y1 443 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 SUGP1Q8IWZ8 645 aaKnown RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 TAB3Q8N5C8 712 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 LRRC52Q8N7C0 313 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 SYN2Q92777 582 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 BADQ92934 168 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 TTC17Q96AE7 1141 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 ERP27Q96DN0 273 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 FAM81BQ96LP2 452 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 KCNF1Q9H3M0 494 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 IL23AQ9NPF7 189 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 MAN1C1Q9NR34 630 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 ZDHHC3Q9NYG2 299 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 CLIC5Q9NZA1 410 aa8.47□□□□□ -1.05
SCARB2-220ENST00000640076 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-220ENST00000640076 EFCAB14O75071 495 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 PNMA6AP0CW24 399 aaPredicted RBP8.46□□□□□ -1.05
SCARB2-220ENST00000640076 TBXAS1P24557 533 aaPredicted RBP8.46□□□□□ -1.05
SCARB2-220ENST00000640076 FLT3P36888 993 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 ASPAP45381 313 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 GRIA4P48058 902 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 CCZ1BP86790 482 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 CCZ1P86791 482 aaPredicted RBP8.46□□□□□ -1.05
SCARB2-220ENST00000640076 FPGSQ05932 587 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 MYO1EQ12965 1108 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 GALEQ14376 348 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 MEA1Q16626 185 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 WDR72Q3MJ13 1102 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 HS1BP3Q53T59 392 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 ZNF667Q5HYK9 610 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 NOMO2Q5JPE7 1267 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 RASIP1Q5U651 963 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 YOD1Q5VVQ6 348 aaPredicted RBP8.46□□□□□ -1.05
SCARB2-220ENST00000640076 WDR59Q6PJI9 974 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM139Q8IV31 216 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 ABI1Q8IZP0 508 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 URGCPQ8TCY9 931 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 SHC3Q92529 594 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 JAKMIP2Q96AA8 810 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 FAXDC2Q96IV6 333 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 KLHL11Q9NVR0 708 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 AIPL1Q9NZN9 384 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 CACNG4Q9UBN1 327 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 SUCOQ9UBS9 1254 aaKnown RBP8.46□□□□□ -1.05
SCARB2-220ENST00000640076 ANKRD6Q9Y2G4 727 aa8.46□□□□□ -1.05
SCARB2-220ENST00000640076 FNDC1Q4ZHG4 1894 aaPredicted RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 FOXN3O00409 490 aaPredicted RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 BAIAP3O94812 1187 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 RBP3P10745 1247 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 SYN1P17600 705 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 RPL9P32969 192 aaKnown RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 PNPLA4P41247 253 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 STAT1P42224 750 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 GATMP50440 423 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 WDR5P61964 334 aaKnown RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 DSC1Q08554 894 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 PPIGQ13427 754 aaKnown RBP eCLIP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 TUSC3Q13454 348 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 SFMBT2Q5VUG0 894 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 KRT77Q7Z794 578 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 FAM71AQ8IYT1 594 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 CCDC112Q8NEF3 446 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 CASD1Q96PB1 797 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 BAG1Q99933 345 aaPredicted RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 PAAF1Q9BRP4 392 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 TRIM39Q9HCM9 518 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 TBC1D13Q9NVG8 400 aa8.46□□□□□ -1.06
SCARB2-220ENST00000640076 ZNHIT6Q9NWK9 470 aaKnown RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.06
SCARB2-220ENST00000640076 CASTOR2A6NHX0 329 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 PODXLO00592 558 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 NEMP1O14524 444 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 B4GALT3O60512 393 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 GFPT2O94808 682 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 DDHD2O94830 711 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 AMHP03971 560 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 PF4V1P10720 104 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 P4HA1P13674 534 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms