RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 LIG4P49917 911 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 PSMA6P60900 246 aaKnown RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 ZNF211Q13398 564 aaPredicted RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 TMEM132DQ14C87 1099 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 TEAD4Q15561 434 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 TRIP6Q15654 476 aaKnown RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 ECM1Q16610 540 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 COL28A1Q2UY09 1125 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 SV2CQ496J9 727 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 C9orf57Q5W0N0 161 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 CCNI2Q6ZMN8 369 aaPredicted RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 C1orf186Q6ZWK4 172 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 TMEM150AQ86TG1 271 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 NT5DC4Q86YG4 428 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 EFCAB13Q8IY85 973 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 TMEFF1Q8IYR6 380 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 DAW1Q8N136 415 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 CHCHD4Q8N4Q1 142 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 IGSF22Q8N9C0 903 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 FUBP3Q96I24 572 aaKnown RBP eCLIP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 ZNF560Q96MR9 790 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 FNBP1Q96RU3 617 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 PYM1Q9BRP8 204 aaKnown RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 GTPBP2Q9BX10 602 aaKnown RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 ZDHHC5Q9C0B5 715 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 FOXP1Q9H334 677 aaPredicted RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 POLD4Q9HCU8 107 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 POLR3BQ9NW08 1133 aaPredicted RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 DKK4Q9UBT3 224 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 NOL7Q9UMY1 257 aaKnown RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 ARHGAP26Q9UNA1 814 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 MAGED2Q9UNF1 606 aaPredicted RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 INVSQ9Y283 1065 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 DNMT3AQ9Y6K1 912 aaPredicted RBP6.69□□□□□ -1.34
PRKCH-228ENST00000640011 IGF2RP11717 2491 aa6.69□□□□□ -1.34
PRKCH-228ENST00000640011 SDK1Q7Z5N4 2213 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 A0A0A0MRY4 1105 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SOWAHDA6NJG2 315 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 E9PMD0 336 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 APODP05090 189 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 NFICP08651 508 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 HDCP19113 662 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 U2AF2P26368 475 aaKnown RBP eCLIP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 GPC1P35052 558 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 GRIA2P42262 883 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 PTGER3P43115 390 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 TNFRSF4P43489 277 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 ANAPC15P60006 121 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 MYL7Q01449 175 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 RPL6Q02878 288 aaKnown RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 ZNF33AQ06730 810 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SPAG1Q07617 926 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 MAPK7Q13164 816 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 ZNF174Q15697 407 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 ENOX2Q16206 610 aaKnown RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 CFAP221Q4G0U5 840 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 PKDCCQ504Y2 493 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SEZ6Q53EL9 994 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 C4orf17Q53FE4 359 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 TTC38Q5R3I4 469 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SYCP2LQ5T4T6 812 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SLFN12LQ6IEE8 588 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 GLRX5Q86SX6 157 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 TTC30AQ86WT1 665 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 DDX42Q86XP3 938 aaKnown RBP eCLIP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 TMEM86AQ8N2M4 240 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 PGBD3Q8N328 593 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 MINDY1Q8N5J2 469 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SYT2Q8N9I0 419 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 IL17RCQ8NAC3 791 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 NSUN7Q8NE18 718 aaKnown RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 SH3RF2Q8TEC5 729 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 GTF3C6Q969F1 213 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 PNKPQ96T60 521 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 ACBD6Q9BR61 282 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 CAPN10Q9HC96 672 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 TRPC7Q9HCX4 862 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 TMEM74BQ9NUR3 256 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 KIAA1522Q9P206 1035 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 DACH1Q9UI36 760 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 MBD1Q9UIS9 605 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 CPSF3Q9UKF6 684 aaKnown RBP6.68□□□□□ -1.34
PRKCH-228ENST00000640011 ODF2LQ9ULJ1 636 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 WNT6Q9Y6F9 365 aa6.68□□□□□ -1.34
PRKCH-228ENST00000640011 A0A0B4J269 797 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 CAPN8A6NHC0 703 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 KPNA7A9QM74 516 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 E9PAM4 449 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 ST8SIA5O15466 376 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 KLF8O95600 359 aaPredicted RBP6.67□□□□□ -1.34
PRKCH-228ENST00000640011 ABL1P00519 1130 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 PIGRP01833 764 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 FTH1P19P0C7X4 201 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 CD59P13987 128 aa6.67□□□□□ -1.34
PRKCH-228ENST00000640011 ITPKAP23677 461 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms