RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ZNF606Q8WXB4 792 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 FOXRED1Q96CU9 486 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 ERO1AQ96HE7 468 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 FAM167AQ96KS9 214 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 MOGAT1Q96PD6 335 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 TMEM237Q96Q45 408 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 ACAT2Q9BWD1 397 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 OSBPL6Q9BZF3 934 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 EPB41L4AQ9HCS5 686 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 PCDHA1Q9Y5I3 950 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 TAF1P21675 1872 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 WTIPA6NIX2 430 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 GPR25O00155 361 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 ADAM20O43506 726 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 APOL3O95236 402 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 CNPP09543 421 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PCP11498 1178 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 TLX1P31314 330 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 AARSP49588 968 aaKnown RBP eCLIP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 CSE1LP55060 971 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 RIPK4P57078 832 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 AP2B1P63010 937 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 MGAT2Q10469 447 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 EPS8Q12929 822 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SCARF1Q14162 830 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 MUM1L1Q5H9M0 696 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 KHDC1LQ5JSQ8 128 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 RTP2Q5QGT7 225 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 MCTP2Q6DN12 878 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 RNF44Q7L0R7 432 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 RRAGAQ7L523 313 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 ANKS1BQ7Z6G8 1248 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 GATAD2AQ86YP4 633 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 DIS3L2Q8IYB7 885 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 ZNF384Q8TF68 577 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 METTL22Q9BUU2 404 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 DPH1Q9BZG8 443 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 TBC1D14Q9P2M4 693 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PI4KBQ9UBF8 816 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 CHORDC1Q9UHD1 332 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 AP4E1Q9UPM8 1137 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 MTO1Q9Y2Z2 717 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 EPN1Q9Y6I3 576 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 POLR2AP24928 1970 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 CCDC78A2IDD5 438 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PTGES3LE9PB15 166 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SOCS5O75159 536 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 TSPAN9O75954 239 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PCCAP05165 728 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 ETV3P41162 512 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SPIRE1Q08AE8 756 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 IFT88Q13099 833 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 COG2Q14746 738 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 ODF2Q5BJF6 829 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 BMP2KLQ5H9B9 411 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 MTFR2Q6P444 385 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 IYDQ6PHW0 289 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SLC2A7Q6PXP3 512 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PIWIL3Q7Z3Z3 882 aaKnown RBP7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SPATA18Q8TC71 538 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PIGOQ8TEQ8 1089 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 NUDT8Q8WV74 236 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 CFHR4Q92496 578 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SDCCAG3Q96C92 435 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 KIF1BPQ96EK5 621 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 CLPTM1LQ96KA5 538 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 MRGPRX4Q96LA9 322 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 RABEP2Q9H5N1 569 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 PDE7BQ9NP56 450 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 POLLQ9UGP5 575 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 SH3BGRL2Q9UJC5 107 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 HSF4Q9ULV5 492 aa7.91□□□□□ -1.14
NECAP1-220ENST00000639841 C7orf72A4D263 438 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 TMEM110-MUSTN1A8MSY1 372 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 RNGTTO60942 597 aaKnown RBP7.9□□□□□ -1.14
NECAP1-220ENST00000639841 SLU7O95391 586 aaKnown RBP7.9□□□□□ -1.14
NECAP1-220ENST00000639841 CASQ1P31415 396 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 CIITAP33076 1130 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 SLC14A1Q13336 389 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 MAN2A1Q16706 1144 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 STRIP1Q5VSL9 837 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 CCBE1Q6UXH8 406 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-220ENST00000639841 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-220ENST00000639841 SCML4Q8N228 414 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 OR6Y1Q8NGX8 325 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 OR14C36Q8NHC7 312 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 PIP4K2CQ8TBX8 421 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 CABS1Q96KC9 395 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 HDAC8Q9BY41 377 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 TRIM6Q9C030 488 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-220ENST00000639841 COA1Q9GZY4 146 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 GREM2Q9H772 168 aa7.9□□□□□ -1.14
NECAP1-220ENST00000639841 AJAP1Q9UKB5 411 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-220ENST00000639841 FAM90A27PA6NNH2 459 aa7.9□□□□□ -1.15
NECAP1-220ENST00000639841 SGTAO43765 313 aa7.9□□□□□ -1.15
NECAP1-220ENST00000639841 USP1O94782 785 aa7.9□□□□□ -1.15
NECAP1-220ENST00000639841 APBB3O95704 486 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms