RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 SLC44A1Q8WWI5 657 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 ALKBH8Q96BT7 664 aaKnown RBP9.78□□□□□ -0.84
NECAP1-215ENST00000639071 RILPQ96NA2 401 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PEBP4Q96S96 227 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 SHCBP1LQ9BZQ2 653 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 C20orf27Q9GZN8 174 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PPCSQ9HAB8 311 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PAPOLBQ9NRJ5 636 aaKnown RBP9.78□□□□□ -0.84
NECAP1-215ENST00000639071 KRT82Q9NSB4 513 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PCMTD2Q9NV79 361 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PGAP2Q9UHJ9 254 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 LRCH1Q9Y2L9 728 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 I3L4J1 428 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 KCNN4O15554 427 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 MAP3K7O43318 606 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 DKC1O60832 514 aaKnown RBP eCLIP9.78□□□□□ -0.84
NECAP1-215ENST00000639071 DHRS4L1P0CG22 281 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 CACNA2D1P54289 1103 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 HMGCS2P54868 508 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 SARNPP82979 210 aaKnown RBP9.78□□□□□ -0.84
NECAP1-215ENST00000639071 BIRC2Q13490 618 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 MROH9Q5TGP6 573 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 FOXB2Q5VYV0 432 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PPFIBP2Q8ND30 876 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 UBA3Q8TBC4 463 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 PRPF31Q8WWY3 499 aaKnown RBP9.78□□□□□ -0.84
NECAP1-215ENST00000639071 TWNKQ96RR1 684 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 EBF4Q9BQW3 602 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 SCOCQ9UIL1 159 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 USP18Q9UMW8 372 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 MAD1L1Q9Y6D9 718 aa9.78□□□□□ -0.84
NECAP1-215ENST00000639071 APOC4-APOC2K7ER74 178 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 SMAPO00193 183 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 HNRNPCL1O60812 293 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 APOC2P02655 101 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 APRTP07741 180 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 EIF4BP23588 611 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 ARL2P36404 184 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 PAPOLAP51003 745 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 MRPS5P82675 430 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 CNTN2Q02246 1040 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 DUOXA2Q1HG44 320 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 FAM102AQ5T9C2 384 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 OR52E8Q6IFG1 317 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 IRGCQ6NXR0 463 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 SCYL2Q6P3W7 929 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 RIPOR1Q6ZS17 1223 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 SH2D5Q6ZV89 423 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 POLNQ7Z5Q5 900 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 BRSK2Q8IWQ3 736 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 TMEM192Q8IY95 271 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 NIPA2Q8N8Q9 360 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 TTC13Q8NBP0 860 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 SH3TC2Q8TF17 1288 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 PIWIL1Q96J94 861 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 MMP19Q99542 508 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 VCXQ9H320 206 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 DHX33Q9H6R0 707 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 SMYD2Q9NRG4 433 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 PIH1D1Q9NWS0 290 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 SLC17A6Q9P2U8 582 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 ZC3H7BQ9UGR2 993 aaKnown RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 NR2E3Q9Y5X4 410 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 TEX264Q9Y6I9 313 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 RGPD3A6NKT7 1758 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-215ENST00000639071 RGPD4Q7Z3J3 1758 aa9.77□□□□□ -0.84
NECAP1-215ENST00000639071 PRR5-ARHGAP8B1AHC4 643 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 DNAJC6O75061 913 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 CSDE1O75534 798 aaKnown RBP9.77□□□□□ -0.85
NECAP1-215ENST00000639071 RNF8O76064 485 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 YWHAZP63104 245 aaKnown RBP9.77□□□□□ -0.85
NECAP1-215ENST00000639071 ARHGAP8P85298 464 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 TAP1Q03518 808 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 AP1B1Q10567 949 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 TMEM132BQ14DG7 1078 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 SGSM1Q2NKQ1 1148 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 SPDYAQ5MJ70 313 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 TRMT10BQ6PF06 316 aaKnown RBP9.77□□□□□ -0.85
NECAP1-215ENST00000639071 IZUMO2Q6UXV1 221 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 FAM83AQ86UY5 434 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 XYLT1Q86Y38 959 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 WDR49Q8IV35 697 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 SMC1BQ8NDV3 1235 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 CCDC110Q8TBZ0 833 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 E2F7Q96AV8 911 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 PANX3Q96QZ0 392 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 PPP1R16BQ96T49 567 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 SMYD3Q9H7B4 428 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 MAP3K20Q9NYL2 800 aaKnown RBP9.77□□□□□ -0.85
NECAP1-215ENST00000639071 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 STX18Q9P2W9 335 aaKnown RBP9.77□□□□□ -0.85
NECAP1-215ENST00000639071 FETUBQ9UGM5 382 aa9.77□□□□□ -0.85
NECAP1-215ENST00000639071 E2F8A0AVK6 867 aa9.76□□□□□ -0.85
NECAP1-215ENST00000639071 M0QYV0 167 aa9.76□□□□□ -0.85
NECAP1-215ENST00000639071 B4GALT5O43286 388 aa9.76□□□□□ -0.85
NECAP1-215ENST00000639071 ADCY3O60266 1144 aa9.76□□□□□ -0.85
NECAP1-215ENST00000639071 LYPLA1O75608 230 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-215ENST00000639071 SORBS2O94875 1100 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms