RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 ZSCAN5CA6NGD5 496 aaPredicted RBP17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 ITGB3P05106 788 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 HMBSP08397 361 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 FAM58BPP0C7Q3 252 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 RARBP10826 455 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 SOAT1P35610 550 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 EFCAB12Q6NXP0 572 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 SLC47A2Q86VL8 602 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 SH3TC2Q8TF17 1288 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 TFB1MQ8WVM0 346 aaKnown RBP17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 OLFM1Q99784 485 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 PPP4CP60510 307 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 ZNF483Q8TF39 744 aaPredicted RBP17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 STX7O15400 261 aaKnown RBP17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 AKAP3O75969 853 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 TALDO1P37837 337 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 HDAC7Q8WUI4 952 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 RAB21Q9UL25 225 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 A0A087X0B3 334 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 MAP3K13O43283 966 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 AVPR1AP37288 418 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 KBTBD12Q3ZCT8 623 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 NT5DC1Q5TFE4 455 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 C2orf69Q8N8R5 385 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 WDR48Q8TAF3 677 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 UBASH3BQ8TF42 649 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 HPDLQ96IR7 371 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 DCUN1D5Q9BTE7 237 aa17.79■□□□□ 0.44
HNRNPU-217ENST00000638952 FAM153BP0C7A2 387 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 HSMCR30P0CW71 290 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ACADSBP45954 432 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 FAM153CQ494X1 144 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TRIQKQ629K1 86 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 BNC2Q6ZN30 1099 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ELMOD1Q8N336 334 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 UXS1Q8NBZ7 420 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 PKP3Q9Y446 797 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 O00370 1275 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ATP12AP54707 1039 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 NCF4Q15080 339 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 C4orf22Q6V702 233 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 LRRC8DQ7L1W4 858 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 FAM151AQ8WW52 585 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TMEM79Q9BSE2 394 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 THUMPD3Q9BV44 507 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TK2O00142 265 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 MAP3K6O95382 1288 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 THRAP10827 490 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 KRT77Q7Z794 578 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 RDM1Q8NG50 284 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 CENPTQ96BT3 561 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 DCUN1D1Q96GG9 259 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 C6orf62Q9GZU0 229 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 CLCA2Q9UQC9 943 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 UBOX5O94941 541 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TFRCP02786 760 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ITGA4P13612 1032 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 CCDC33Q8N5R6 958 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 QKIQ96PU8 341 aaKnown RBP eCLIP17.78■□□□□ 0.445e-7■□□□□ 8.1
HNRNPU-217ENST00000638952 KRT84Q9NSB2 600 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ITGB1BP2Q9UKP3 347 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 TCRBV5S4A2TA0A5A2 114 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ARP10275 920 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 PTGER2P43116 358 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 MTDHQ86UE4 582 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 SNX31Q8N9S9 440 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ZNRF3Q9ULT6 936 aa17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 ABT1Q9ULW3 272 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-217ENST00000638952 KIF20BQ96Q89 1820 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 SNTNA6NMZ2 147 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 AP1G2O75843 785 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 NFIL3Q16649 462 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 TFDP3Q5H9I0 405 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 PAFAH2Q99487 392 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 TMEM120AQ9BXJ8 343 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 SERHL2Q9H4I8 314 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 TRPC7Q9HCX4 862 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 SERHLQ9NQF3 203 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 COL3A1P02461 1466 aaPredicted RBP17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 NDUFS3O75489 264 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 RAB42Q8N4Z0 105 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 CTNNAL1Q9UBT7 734 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 CHRNB3Q05901 458 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 ARHGEF6Q15052 776 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 Q4G0T1 1027 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 SGO1Q5FBB7 561 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 PDZK1Q5T2W1 519 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 C11orf63Q6NUN7 778 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 CAPSLQ8WWF8 208 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 VTA1Q9NP79 307 aa17.77■□□□□ 0.44
HNRNPU-217ENST00000638952 PSMB9P28065 219 aa17.77■□□□□ 0.43
HNRNPU-217ENST00000638952 FLT3P36888 993 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms