RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 TSTD1Q8NFU3 115 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 SCAMP5Q8TAC9 235 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 TMEM174Q8WUU8 243 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 OVCA2Q8WZ82 227 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 TNIP3Q96KP6 325 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 MED10Q9BTT4 135 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 KCTD10Q9H3F6 313 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 TNFRSF10BO14763 440 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 COCHO43405 550 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 PFKFB1P16118 471 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 SLC6A11P48066 632 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 DGKEP52429 567 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 LIMK1P53667 647 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 SLC5A3P53794 718 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 MESP2Q0VG99 397 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 IL31Q6EBC2 164 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 RHBDF2Q6PJF5 856 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 ACOT1Q86TX2 421 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 C12orf40Q86WS4 652 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 DDX42Q86XP3 938 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMN2-216ENST00000638794 SFTPA1Q8IWL2 248 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 FUKQ8N0W3 1084 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 SMARCD1Q96GM5 515 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 ZFRQ96KR1 1074 aaKnown RBP17.89■□□□□ 0.45
SMN2-216ENST00000638794 DMAP1Q9NPF5 467 aaPredicted RBP17.89■□□□□ 0.45
SMN2-216ENST00000638794 KRT82Q9NSB4 513 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 CHORDC1Q9UHD1 332 aaPredicted RBP17.89■□□□□ 0.45
SMN2-216ENST00000638794 CHD8Q9HCK8 2581 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 THADAQ6YHU6 1953 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 CACNA1BQ00975 2339 aa17.89■□□□□ 0.45
SMN2-216ENST00000638794 PDXKO00764 312 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 ADH1CP00326 375 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 NR3C1P04150 777 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 CCDC130P13994 396 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 ORC1Q13415 861 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 ELF2Q15723 593 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 ZACNQ401N2 412 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 HECTD3Q5T447 861 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 SNX30Q5VWJ9 437 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 ANO7Q6IWH7 933 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 CCDC33Q8N5R6 958 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 PNKPQ96T60 521 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 TPSD1Q9BZJ3 242 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 CCSER2Q9H7U1 834 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 VPS45Q9NRW7 570 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 IL37Q9NZH6 218 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 GMIPQ9P107 970 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 HMGXB4Q9UGU5 601 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 MMP17Q9ULZ9 603 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 INVSQ9Y283 1065 aa17.88■□□□□ 0.45
SMN2-216ENST00000638794 MYO18AQ92614 2054 aaKnown RBP17.87■□□□□ 0.45
SMN2-216ENST00000638794 E2F8A0AVK6 867 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 AP1G2O75843 785 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 KAT7O95251 611 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 CHRM1P11229 460 aaPredicted RBP17.87■□□□□ 0.45
SMN2-216ENST00000638794 ADH5P11766 374 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 P4HA1P13674 534 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 KCNA4P22459 653 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 GBP1P32455 592 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 EIF2DP41214 584 aaKnown RBP17.87■□□□□ 0.45
SMN2-216ENST00000638794 CREB5Q02930 508 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 CRY1Q16526 586 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 SGSM1Q2NKQ1 1148 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 TCEAL6Q6IPX3 200 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 SPOPLQ6IQ16 392 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 RASSF3Q86WH2 238 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 ZMIZ2Q8NF64 920 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 DDX1Q92499 740 aaKnown RBP17.87■□□□□ 0.45
SMN2-216ENST00000638794 TCEAL3Q969E4 200 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 CNOT6LQ96LI5 555 aaKnown RBP17.87■□□□□ 0.45
SMN2-216ENST00000638794 TBC1D14Q9P2M4 693 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 HPSEQ9Y251 543 aa17.87■□□□□ 0.45
SMN2-216ENST00000638794 FAM92AA1XBS5 289 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 TM4SF5O14894 197 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 BEST1O76090 585 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 ASS1P00966 412 aaKnown RBP17.86■□□□□ 0.45
SMN2-216ENST00000638794 RPN1P04843 607 aaKnown RBP17.86■□□□□ 0.45
SMN2-216ENST00000638794 ZDHHC11BP0C7U3 371 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 HNRNPLP14866 589 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMN2-216ENST00000638794 CMA1P23946 247 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 ASPAP45381 313 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 TUBP50607 506 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 NDST1P52848 882 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 MRPS21P82921 87 aaKnown RBP17.86■□□□□ 0.45
SMN2-216ENST00000638794 KDSRQ06136 332 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 USP39Q53GS9 565 aaKnown RBP17.86■□□□□ 0.45
SMN2-216ENST00000638794 LY6G5CQ5SRR4 150 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 C1orf220Q5T0J3 134 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 STPG1Q5TH74 334 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 TMEM92Q6UXU6 159 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 SV2AQ7L0J3 742 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 ALLCQ8N6M5 410 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 TXNDC5Q8NBS9 432 aaKnown RBP17.86■□□□□ 0.45
SMN2-216ENST00000638794 MDGA1Q8NFP4 955 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 SLC2A14Q8TDB8 520 aa17.86■□□□□ 0.45
SMN2-216ENST00000638794 TMC2Q8TDI7 906 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms