RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 HCSTQ9UBK5 93 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 TBX21Q9UL17 535 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 TTC3P53804 2025 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 FAM187AA6NFU0 413 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 C3orf70A6NLC5 250 aaPredicted RBP22.72■■□□□ 1.23
SCARB2-212ENST00000638663 TADA2AO75478 443 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 CDKN2BP42772 138 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 BCAR1P56945 870 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 TFDP3Q5H9I0 405 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 EFHC1Q5JVL4 640 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 FAM43BQ6ZT52 329 aaPredicted RBP22.72■■□□□ 1.23
SCARB2-212ENST00000638663 NPAS4Q8IUM7 802 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 CRIPAKQ8N1N5 446 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 FAM118BQ9BPY3 351 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 DCLK3Q9C098 648 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 DPH5Q9H2P9 285 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 TMEM39AQ9NV64 488 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 hCG_1818297A0A087WSY0 165 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 DAPK3O43293 454 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 PRPSAP2O60256 369 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 TFE3P19532 575 aaPredicted RBP22.72■■□□□ 1.23
SCARB2-212ENST00000638663 KDELR1P24390 212 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 GJA8P48165 433 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 TKTL1P51854 596 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 EPHB4P54760 987 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 MRPS5P82675 430 aaKnown RBP22.72■■□□□ 1.23
SCARB2-212ENST00000638663 TSPY1Q01534 308 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 SCYL2Q6P3W7 929 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 FAM149B1Q96BN6 582 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 RUNDC3BQ96NL0 473 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 RAB17Q9H0T7 212 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 RASAL2Q9UJF2 1139 aa22.72■■□□□ 1.23
SCARB2-212ENST00000638663 NRP1O14786 923 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 HOXA2O43364 376 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 TJP3O95049 919 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 DESP17661 470 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 BDNFP23560 247 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 PTPN7P35236 360 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 HLTFQ14527 1009 aaKnown RBP eCLIP22.71■■□□□ 1.23
SCARB2-212ENST00000638663 CASP8Q14790 479 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 CYP4V2Q6ZWL3 525 aaPredicted RBP22.71■■□□□ 1.23
SCARB2-212ENST00000638663 SND1Q7KZF4 910 aaKnown RBP eCLIP22.71■■□□□ 1.232e-6■■□□□ 13.9
SCARB2-212ENST00000638663 ARCQ7LC44 396 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 GPRIN1Q7Z2K8 1008 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 KCTD6Q8NC69 237 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 ERP44Q9BS26 406 aa22.71■■□□□ 1.23
SCARB2-212ENST00000638663 TBKBP1A7MCY6 615 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 MAP2K7O14733 419 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 TRAPPC3O43617 180 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 CD48P09326 243 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 PTPN9P43378 593 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 CUL1Q13616 776 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 PAWRQ96IZ0 340 aaKnown RBP22.7■■□□□ 1.23
SCARB2-212ENST00000638663 DDX23Q9BUQ8 820 aaKnown RBP22.7■■□□□ 1.23
SCARB2-212ENST00000638663 ULBP1Q9BZM6 244 aa22.7■■□□□ 1.23
SCARB2-212ENST00000638663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.7■■□□□ 1.23
SCARB2-212ENST00000638663 HSF2BPO75031 334 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 EMBQ6PCB8 327 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 DEFB106AQ8N104 65 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 CMASQ8NFW8 434 aaPredicted RBP22.7■■□□□ 1.22
SCARB2-212ENST00000638663 SEC14L1Q92503 715 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 ADAM33Q9BZ11 813 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 CSNK1G1Q9HCP0 422 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.7■■□□□ 1.22
SCARB2-212ENST00000638663 ADAM28Q9UKQ2 775 aa22.7■■□□□ 1.22
SCARB2-212ENST00000638663 HHLA1C9JL84 531 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 ECEL1O95672 775 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 ALDH2P05091 517 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 CLTBP09497 229 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 FAM153BP0C7A2 387 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 SLC11A1P49279 550 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 LBX1P52954 281 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 HDAC4P56524 1084 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 MAPRE1Q15691 268 aaKnown RBP22.69■■□□□ 1.22
SCARB2-212ENST00000638663 CCNG2Q16589 344 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 FAM153CQ494X1 144 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 DUPD1Q68J44 220 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.69■■□□□ 1.22
SCARB2-212ENST00000638663 C11orf84Q9BUA3 381 aaPredicted RBP22.69■■□□□ 1.22
SCARB2-212ENST00000638663 C11orf49Q9H6J7 331 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 HOMER3Q9NSC5 361 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 FAM153AQ9UHL3 310 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 UPP2O95045 317 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 OR4Q2P0C623 313 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 ECHS1P30084 290 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 MATKP42679 507 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 YWHAZP63104 245 aaKnown RBP22.69■■□□□ 1.22
SCARB2-212ENST00000638663 LRRC26Q2I0M4 334 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 RAB41Q5JT25 222 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 CENPIQ92674 756 aaPredicted RBP22.69■■□□□ 1.22
SCARB2-212ENST00000638663 MRPL9Q9BYD2 267 aaKnown RBP22.69■■□□□ 1.22
SCARB2-212ENST00000638663 FAM114A2Q9NRY5 505 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 FAN1Q9Y2M0 1017 aa22.69■■□□□ 1.22
SCARB2-212ENST00000638663 SPDYE4A6NLX3 237 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 DAB1O75553 588 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 FBXO21O94952 628 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 OAZ2O95190 189 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 ATXN1P54253 815 aaKnown RBP22.68■■□□□ 1.22
SCARB2-212ENST00000638663 CDH6P55285 790 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 HFE2Q6ZVN8 426 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms