RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 LCP1P13796 627 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 TNFAIP3P21580 790 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 CBX2Q14781 532 aaPredicted RBP20.44■□□□□ 0.86
HLA-A-209ENST00000638375 TMEM110Q86TL2 294 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 ITFG1Q8TB96 612 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 CPA5Q8WXQ8 436 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 NDRG1Q92597 394 aaKnown RBP20.44■□□□□ 0.86
HLA-A-209ENST00000638375 PPP1R13BQ96KQ4 1090 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 NECTIN4Q96NY8 510 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 FBXO44Q9H4M3 255 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 CYLDQ9NQC7 956 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 GMIPQ9P107 970 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 IMPACTQ9P2X3 320 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 SCML2Q9UQR0 700 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 MRPS23Q9Y3D9 190 aaKnown RBP20.44■□□□□ 0.86
HLA-A-209ENST00000638375 A0A1W2PRU2 124 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 ERBB2P04626 1255 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 USP17L7P0C7H9 530 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 CEBPBP17676 345 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 FSHRP23945 695 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 ACADSBP45954 432 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 PGFP49763 221 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 CYP4F8P98187 520 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 PM20D1Q6GTS8 502 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 PTCRAQ6ISU1 281 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-209ENST00000638375 POTEHQ6S545 545 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 BHLHA9Q7RTU4 235 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 CCDC186Q7Z3E2 898 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 SIX6OS1Q8N1H7 587 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 SLC30A5Q8TAD4 765 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 CLEC4CQ8WTT0 213 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 NOX5Q96PH1 765 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 SLITRK1Q96PX8 696 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 CHP1Q99653 195 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 ATXN3LQ9H3M9 355 aa20.43■□□□□ 0.86
HLA-A-209ENST00000638375 ZNHIT6Q9NWK9 470 aaKnown RBP20.43■□□□□ 0.86
HLA-A-209ENST00000638375 PRUNE2Q8WUY3 3088 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 DENND4AQ7Z401 1863 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 ZNF197O14709 1029 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 PAPSS1O43252 624 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-209ENST00000638375 FGF19O95750 216 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 ZBED1O96006 694 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 ZDHHC11BP0C7U3 371 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 CDC25CP30307 473 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 EIF4A3P38919 411 aaKnown RBP20.42■□□□□ 0.86
HLA-A-209ENST00000638375 DAOAP59103 153 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 CENPCQ03188 943 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 TEAD2Q15562 447 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 SMAD2Q15796 467 aaKnown RBP20.42■□□□□ 0.86
HLA-A-209ENST00000638375 TSR1Q2NL82 804 aaKnown RBP20.42■□□□□ 0.86
HLA-A-209ENST00000638375 GET4Q7L5D6 327 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-209ENST00000638375 SCML4Q8N228 414 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 ING5Q8WYH8 240 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 OVCA2Q8WZ82 227 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 NMUR1Q9HB89 426 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 CNGB3Q9NQW8 809 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 TAS2R14Q9NYV8 317 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 CHORDC1Q9UHD1 332 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-209ENST00000638375 XIRP2A4UGR9 3374 aa20.42■□□□□ 0.86
HLA-A-209ENST00000638375 ZNF840PA6NDX5 716 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 IL9P15248 144 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 CDK17Q00537 523 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
HLA-A-209ENST00000638375 C2CD6Q53TS8 623 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 STXBP5Q5T5C0 1151 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 SCD5Q86SK9 330 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 ERICH1Q86X53 443 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 SCUBE3Q8IX30 993 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 PDZD8Q8NEN9 1154 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 IPO4Q8TEX9 1081 aaKnown RBP20.41■□□□□ 0.86
HLA-A-209ENST00000638375 GCNAQ96QF7 691 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 MIS12Q9H081 205 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 TRPM5Q9NZQ8 1165 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 ADAMTS1Q9UHI8 967 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 NCANO14594 1321 aa20.41■□□□□ 0.86
HLA-A-209ENST00000638375 ZNF638Q14966 1978 aaKnown RBP20.41■□□□□ 0.86
HLA-A-209ENST00000638375 A0A1W2PQH9 124 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 SSU72P8A0A1W2PR75 194 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 FBXO21O94952 628 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 MMP8P22894 467 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 GABRB2P47870 512 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 KCNQ1P51787 676 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 MRPS5P82675 430 aaKnown RBP20.4■□□□□ 0.86
HLA-A-209ENST00000638375 PTP4A2Q12974 167 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 ASTE1Q2TB18 679 aaPredicted RBP20.4■□□□□ 0.86
HLA-A-209ENST00000638375 PUS10Q3MIT2 529 aaKnown RBP20.4■□□□□ 0.86
HLA-A-209ENST00000638375 MMS22LQ6ZRQ5 1243 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 PHF13Q86YI8 300 aaPredicted RBP20.4■□□□□ 0.86
HLA-A-209ENST00000638375 NPAS3Q8IXF0 933 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 PIWIL1Q96J94 861 aaKnown RBP20.4■□□□□ 0.86
HLA-A-209ENST00000638375 PANX2Q96RD6 677 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 MYADMQ96S97 322 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 C11orf70Q9BRQ4 267 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.4■□□□□ 0.86
HLA-A-209ENST00000638375 OSER1Q9NX31 292 aa20.4■□□□□ 0.86
HLA-A-209ENST00000638375 MYO16Q9Y6X6 1858 aa20.39■□□□□ 0.86
HLA-A-209ENST00000638375 COL6A3P12111 3177 aa20.39■□□□□ 0.85
HLA-A-209ENST00000638375 A0A087X0T9 212 aa20.39■□□□□ 0.85
HLA-A-209ENST00000638375 YJEFN3A6XGL0 299 aa20.39■□□□□ 0.85
HLA-A-209ENST00000638375 TMCO5BA8MYB1 307 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms