RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CCDC189A1A4V9 331 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 ZNF189O75820 626 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 PCYOX1LQ8NBM8 494 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 TNIP2Q8NFZ5 429 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 COLEC11Q9BWP8 271 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 BARHL2Q9NY43 387 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIM66O15016 1216 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 PDZK1Q5T2W1 519 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TTC33Q6PID6 262 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 KIAA0408Q6ZU52 694 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 CYB5R4Q7L1T6 521 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 FAM45AQ8TCE6 357 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 MPP4Q96JB8 637 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TAF1DQ9H5J8 278 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SH3BP4Q9P0V3 963 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 AXIN2Q9Y2T1 843 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 STAG3L1P0CL83 205 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SRP54P61011 504 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TRAF2Q12933 501 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SMU1Q2TAY7 513 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 RSBN1Q5VWQ0 802 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TEX13BQ9BXU2 312 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SENP6Q9GZR1 1112 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 ERAP1Q9NZ08 941 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 F5H5T6 163 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 NT5C2P49902 561 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 ARMCX4Q5H9R4 360 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 DAB2IPQ5VWQ8 1189 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 UGT3A1Q6NUS8 523 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 KIAA1324Q6UXG2 1013 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 KIF2CQ99661 725 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 INTS2Q9H0H0 1204 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 GGA3Q9NZ52 723 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SNTNA6NMZ2 147 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 KATNA1O75449 491 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 MTFR1Q15390 333 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 COLGALT2Q8IYK4 626 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TMCC3Q9ULS5 477 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 MFN2O95140 757 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 ZNF579Q8NAF0 562 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SLC35C2Q9NQQ7 365 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 MRGBPQ9NV56 204 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 SHOC2Q9UQ13 582 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 TTC37Q6PGP7 1564 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 CASTOR2A6NHX0 329 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 MROH9Q5TGP6 573 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 PLEKHA7Q6IQ23 1121 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 BLOC1S6Q9UL45 172 aa16.86■□□□□ 0.29
CACNA1A-258ENST00000638029 ODC1P11926 461 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 AP3M2P53677 418 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 C21orf59P57076 290 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIT1Q9H3H1 467 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 RTN2O75298 545 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 ERMARDQ5T6L9 678 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 RBM23Q86U06 439 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 ADCY6O43306 1168 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 HNRNPRO43390 633 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 ZNF23P17027 643 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 STXBP1P61764 594 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 AMPD2Q01433 879 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 MMRN1Q13201 1228 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 BIKQ13323 160 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 KIF2BQ8N4N8 673 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 RPRD1AQ96P16 312 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 EVA1BQ9NVM1 165 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 NMRK1Q9NWW6 199 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 CYP2C9P11712 490 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 JSRP1Q96MG2 331 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 PGLYRP2Q96PD5 576 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 TBCDQ9BTW9 1192 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 ZNF185O15231 689 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 OR6B1O95007 311 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 MAPK10P53779 464 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 TINF2Q9BSI4 451 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 VPS28Q9UK41 221 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 COL15A1P39059 1388 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 TALDO1P37837 337 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 SEMA4DQ92854 862 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 PCDHA10Q9Y5I2 948 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 HECW2Q9P2P5 1572 aa16.85■□□□□ 0.29
CACNA1A-258ENST00000638029 TAF4O00268 1085 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 KRT16P08779 473 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 GLRBP48167 497 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 DET1Q7L5Y6 550 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 CNPPD1Q9BV87 410 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 C6orf62Q9GZU0 229 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 TRABDQ9H4I3 376 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 SLC38A7Q9NVC3 462 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 C4BPBP20851 252 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 EML3Q32P44 896 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms