RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 COX4I2Q96KJ9 171 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 CMTM6Q9NX76 183 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 CPB1P15086 417 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 C11orf96Q7Z7L8 435 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 FAM49AQ9H0Q0 323 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 SLC40A1Q9NP59 571 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 POU1F1P28069 291 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 PCSK1P29120 753 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 GYS2P54840 703 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 RMDN3Q96TC7 470 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 TMEM51Q9NW97 253 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 ITSN1Q15811 1721 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 S100A2P29034 98 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 CAPGP40121 348 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 SULT1E1P49888 294 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 CDH18Q13634 790 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 TNFAIP8L3Q5GJ75 292 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 B3GNT6Q6ZMB0 384 aa19.94■□□□□ 0.78
CACNA1A-257ENST00000638009 P4HA2O15460 535 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 IL18RAPO95256 599 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 FDX1P10109 184 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 NCAM1P13591 858 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 MUTP22033 750 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ZDHHC13Q8IUH4 622 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 PGBD3Q8N328 593 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 CCDC3Q9BQI4 270 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 PAIP1Q9H074 479 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 SEMA3DO95025 777 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 HIST1H2ABP04908 130 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 TOP3AQ13472 1001 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 CCNIQ14094 377 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 HIST3H2AQ7L7L0 130 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 HIST1H2ACQ93077 130 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 TRIT1Q9H3H1 467 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 C15orf38-AP3S2A0A0A6YYH1 394 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 PDE8BO95263 885 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 EIF3MQ7L2H7 374 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ARPINQ7Z6K5 226 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ADHFE1Q8IWW8 467 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 UTP15Q8TED0 518 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 MAP4K1Q92918 833 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 TLR7Q9NYK1 1049 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 A0A088AWK7 358 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 G3V2T6 193 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ZNF10P21506 573 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 MSR1P21757 451 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 SPIRE1Q08AE8 756 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 SLC18A3Q16572 532 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 HECTD3Q5T447 861 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 OLFML1Q6UWY5 402 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 AIFM2Q9BRQ8 373 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ETAA1Q9NY74 926 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 SH3BP1Q9Y3L3 701 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 POTECB2RU33 542 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 GLRA3O75311 464 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 NQO1P15559 274 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ITGA3P26006 1051 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 BST2Q10589 180 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 INO80DQ53TQ3 878 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 KYQ8NBH2 561 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 CRLS1Q9UJA2 301 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 TPRP12270 2363 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 TMEM179Q6ZVK1 233 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 DHX40Q8IX18 779 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 TMEM132CQ8N3T6 1108 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 C1orf54Q8WWF1 131 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 RXFP1Q9HBX9 757 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ZNF605Q86T29 641 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 RIN2Q8WYP3 895 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 ZNF302Q9NR11 478 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 CORO2BQ9UQ03 480 aa19.93■□□□□ 0.78
CACNA1A-257ENST00000638009 H3BN98 237 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 RNASEH1O60930 286 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 GCP02774 474 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 FGRP09769 529 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 AP3S2P59780 193 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 PRR23BQ6ZRT6 265 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 SYTL1Q8IYJ3 562 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 GUF1Q8N442 669 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 TSPAN14Q8NG11 270 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 FAM213AQ9BRX8 229 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 SAGE2PA6NJ88 616 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 QPRTQ15274 297 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 EEF1AKMT1Q8WVE0 214 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 EHD3Q9NZN3 535 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 AP1G2O75843 785 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 RBP1P09455 135 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 ALDH3A2P51648 485 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 NFX1Q12986 1120 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 GALNT18Q6P9A2 607 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 ELOA2Q8IYF1 753 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 C1orf131Q8NDD1 294 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 NSUN7Q8NE18 718 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 TRPC4APQ8TEL6 797 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 SAE1Q9UBE0 346 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 FEM1BQ9UK73 627 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 GNB5O14775 395 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms