RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 TNFRSF4P43489 277 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 MYL6P60660 151 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 TNNC1P63316 161 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 WDR72Q3MJ13 1102 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 FAM26FQ5R3K3 315 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 LY6G5CQ5SRR4 150 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 SNX30Q5VWJ9 437 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 PAQR9Q6ZVX9 377 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 LPCAT2Q7L5N7 544 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 TTC30AQ86WT1 665 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 DDX42Q86XP3 938 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 TMEFF1Q8IYR6 380 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 NUP93Q8N1F7 819 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 WHAMMQ8TF30 809 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 SCFD1Q8WVM8 642 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 OVCA2Q8WZ82 227 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 PIGKQ92643 395 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 SLITRK1Q96PX8 696 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 KCNK16Q96T55 309 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 TMEM74BQ9NUR3 256 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 IL37Q9NZH6 218 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 RALYQ9UKM9 306 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 KIAA1549LQ6ZVL6 1849 aa12.9□□□□□ -0.34
CACNA1A-250ENST00000637809 A8MXQ7 604 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 CLIC2O15247 247 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 ZDHHC11BP0C7U3 371 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 CYP2J2P51589 502 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 ASIC1P78348 528 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 KDSRQ06136 332 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 IFRD2Q12894 506 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 FOXC1Q12948 553 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 PEAR1Q5VY43 1037 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 NELFCDQ8IXH7 590 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 KDF1Q8NAX2 398 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 XXYLT1Q8NBI6 393 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 SCAMP5Q8TAC9 235 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 FBXO32Q969P5 355 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 WBP2Q969T9 261 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 DHX58Q96C10 678 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 INTS4Q96HW7 963 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 VRTNQ9H8Y1 702 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 POLMQ9NP87 494 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 TBC1D14Q9P2M4 693 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 NXF1Q9UBU9 619 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 CHORDC1Q9UHD1 332 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 ANAPC1Q9H1A4 1944 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
CACNA1A-250ENST00000637809 UBE4BO95155 1302 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 TCRBV21S2A2A0A5A6 115 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 FAM92AA1XBS5 289 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SPTLC2O15270 562 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 GREM1O60565 184 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 PPP6R2O75170 966 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 ATICP31939 592 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 CASP4P49662 377 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 PGFP49763 221 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 TUBP50607 506 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SLC5A3P53794 718 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 CDH8P55286 799 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 GAD2Q05329 585 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 BMT2Q1RMZ1 405 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SHC4Q6S5L8 630 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 ARMCX6Q7L4S7 300 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 FAM35AQ86V20 835 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SYT12Q8IV01 421 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 HMGB4Q8WW32 186 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 CCSER2Q9H7U1 834 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 CD248Q9HCU0 757 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 PILRBQ9UKJ0 227 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 ZMIZ1Q9ULJ6 1067 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 MYO16Q9Y6X6 1858 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 ZFYVE26Q68DK2 2539 aa12.88□□□□□ -0.35
CACNA1A-250ENST00000637809 LAMA5O15230 3695 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms