RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 IL37Q9NZH6 218 aa21.3■■□□□ 1
CLN6-222ENST00000637667 HMGXB4Q9UGU5 601 aa21.3■■□□□ 1
CLN6-222ENST00000637667 CHORDC1Q9UHD1 332 aaPredicted RBP21.3■■□□□ 1
CLN6-222ENST00000637667 MED19A0JLT2 244 aaPredicted RBP21.29■■□□□ 1
CLN6-222ENST00000637667 SCAMP3O14828 347 aaKnown RBP21.29■■□□□ 1
CLN6-222ENST00000637667 RPP40O75818 363 aaKnown RBP21.29■■□□□ 1
CLN6-222ENST00000637667 AKAP3O75969 853 aa21.29■■□□□ 1
CLN6-222ENST00000637667 CCDC130P13994 396 aa21.29■■□□□ 1
CLN6-222ENST00000637667 ASPAP45381 313 aa21.29■■□□□ 1
CLN6-222ENST00000637667 DHCR24Q15392 516 aa21.29■■□□□ 1
CLN6-222ENST00000637667 GAB4Q2WGN9 574 aa21.29■■□□□ 1
CLN6-222ENST00000637667 HECTD3Q5T447 861 aa21.29■■□□□ 1
CLN6-222ENST00000637667 INTS8Q75QN2 995 aaKnown RBP21.29■■□□□ 1
CLN6-222ENST00000637667 SYT13Q7L8C5 426 aa21.29■■□□□ 1
CLN6-222ENST00000637667 ADGRG2Q8IZP9 1017 aa21.29■■□□□ 1
CLN6-222ENST00000637667 GUF1Q8N442 669 aaKnown RBP21.29■■□□□ 1
CLN6-222ENST00000637667 CCDC26Q8TAB7 109 aa21.29■■□□□ 1
CLN6-222ENST00000637667 SLC2A14Q8TDB8 520 aa21.29■■□□□ 1
CLN6-222ENST00000637667 SMOQ99835 787 aa21.29■■□□□ 1
CLN6-222ENST00000637667 COMMD8Q9NX08 183 aa21.29■■□□□ 1
CLN6-222ENST00000637667 GTF3C3Q9Y5Q9 886 aa21.29■■□□□ 1
CLN6-222ENST00000637667 COCHO43405 550 aa21.28■■□□□ 1
CLN6-222ENST00000637667 ZNF202O95125 648 aa21.28■■□□□ 1
CLN6-222ENST00000637667 TRIM49P0CI25 452 aa21.28■■□□□ 1
CLN6-222ENST00000637667 TRIM49CP0CI26 452 aa21.28■■□□□ 1
CLN6-222ENST00000637667 RPL13P26373 211 aaKnown RBP21.28■■□□□ 1
CLN6-222ENST00000637667 GCLMP48507 274 aa21.28■■□□□ 1
CLN6-222ENST00000637667 ATXN1P54253 815 aaKnown RBP21.28■■□□□ 1
CLN6-222ENST00000637667 DMC1Q14565 340 aa21.28■■□□□ 1
CLN6-222ENST00000637667 CSRP2Q16527 193 aa21.28■■□□□ 1
CLN6-222ENST00000637667 SNX30Q5VWJ9 437 aa21.28■■□□□ 1
CLN6-222ENST00000637667 CACNA2D4Q7Z3S7 1137 aa21.28■■□□□ 1
CLN6-222ENST00000637667 FAM186BQ8IYM0 893 aa21.28■■□□□ 1
CLN6-222ENST00000637667 ZMIZ2Q8NF64 920 aa21.28■■□□□ 1
CLN6-222ENST00000637667 GDPD2Q9HCC8 539 aa21.28■■□□□ 1
CLN6-222ENST00000637667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.28■■□□□ 15e-7■■■■■ 90.8
CLN6-222ENST00000637667 FAM49BQ9NUQ9 324 aa21.28■■□□□ 1
CLN6-222ENST00000637667 GMIPQ9P107 970 aa21.28■■□□□ 1
CLN6-222ENST00000637667 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.28■■□□□ 1
CLN6-222ENST00000637667 HELZP42694 1942 aaKnown RBP21.27■■□□□ 1
CLN6-222ENST00000637667 FAM92AA1XBS5 289 aa21.27■■□□□ 1
CLN6-222ENST00000637667 AXIN1O15169 862 aa21.27■■□□□ 1
CLN6-222ENST00000637667 APBB3O95704 486 aa21.27■■□□□ 1
CLN6-222ENST00000637667 ZDHHC11BP0C7U3 371 aa21.27■■□□□ 1
CLN6-222ENST00000637667 CCDC192P0DO97 292 aa21.27■■□□□ 1
CLN6-222ENST00000637667 KRT13P13646 458 aa21.27■■□□□ 1
CLN6-222ENST00000637667 TUBP50607 506 aa21.27■■□□□ 1
CLN6-222ENST00000637667 ENPEPQ07075 957 aa21.27■■□□□ 1
CLN6-222ENST00000637667 PPP3CAQ08209 521 aa21.27■■□□□ 1
CLN6-222ENST00000637667 C12orf29Q8N999 325 aa21.27■■□□□ 1
CLN6-222ENST00000637667 USP33Q8TEY7 942 aa21.27■■□□□ 1
CLN6-222ENST00000637667 ZFRQ96KR1 1074 aaKnown RBP21.27■■□□□ 1
CLN6-222ENST00000637667 IMPG2Q9BZV3 1241 aa21.27■■□□□ 1
CLN6-222ENST00000637667 CCSER2Q9H7U1 834 aa21.27■■□□□ 1
CLN6-222ENST00000637667 CYP3A43Q9HB55 503 aa21.27■■□□□ 1
CLN6-222ENST00000637667 APOBEC3GQ9HC16 384 aaKnown RBP21.27■■□□□ 1
CLN6-222ENST00000637667 CSNK1G1Q9HCP0 422 aa21.27■■□□□ 1
CLN6-222ENST00000637667 TBC1D14Q9P2M4 693 aa21.27■■□□□ 1
CLN6-222ENST00000637667 TPRP12270 2363 aaKnown RBP21.27■■□□□ 1
CLN6-222ENST00000637667 SPAG17Q6Q759 2223 aa21.27■□□□□ 0.99
CLN6-222ENST00000637667 DNAH14Q0VDD8 3507 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 E2F8A0AVK6 867 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 K7EQS6 105 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 BEST1O76090 585 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 ADH1CP00326 375 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 TRIM21P19474 475 aaKnown RBP21.26■□□□□ 0.99
CLN6-222ENST00000637667 PSMC2P35998 433 aaKnown RBP21.26■□□□□ 0.99
CLN6-222ENST00000637667 INCA1Q0VD86 236 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 ADAM9Q13443 819 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 ZCWPW2Q504Y3 356 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 RHBDF2Q6PJF5 856 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 PRR23CQ6ZRP0 262 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 KBTBD6Q86V97 674 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 TAS1R2Q8TE23 839 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 CCDC34Q96HJ3 373 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 LOXL4Q96JB6 756 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 TWNKQ96RR1 684 aa21.26■□□□□ 0.99
CLN6-222ENST00000637667 CNOT1A5YKK6 2376 aaKnown RBP21.26■□□□□ 0.99
CLN6-222ENST00000637667 FAM200BP0CF97 657 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 ADORA2BP29275 332 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 SEC13P55735 322 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 MAP3K7CLP57077 242 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 NETO1Q8TDF5 533 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 HNRNPABQ99729 332 aaKnown RBP21.25■□□□□ 0.99
CLN6-222ENST00000637667 RTKNQ9BST9 563 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 NIF3L1Q9GZT8 377 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 FBXO44Q9H4M3 255 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 EBF1Q9UH73 591 aa21.25■□□□□ 0.99
CLN6-222ENST00000637667 FOXD2O60548 495 aaPredicted RBP21.24■□□□□ 0.99
CLN6-222ENST00000637667 ADH5P11766 374 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 SLC6A11P48066 632 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 EDRF1Q3B7T1 1238 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 C2orf27AQ580R0 203 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 OTUB2Q96DC9 234 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 PNKPQ96T60 521 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 NT5C1AQ9BXI3 368 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 NACA2Q9H009 215 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 MMRN2Q9H8L6 949 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 TMEM8AQ9HCN3 771 aa21.24■□□□□ 0.99
CLN6-222ENST00000637667 SH3BP1Q9Y3L3 701 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms