RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 NDUFA13Q9P0J0 144 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
CLN5-218ENST00000637397 TFE3P19532 575 aaPredicted RBP16.43■□□□□ 0.22
CLN5-218ENST00000637397 GRK2P25098 689 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 HADHAP40939 763 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 CLCN3P51790 818 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 TBL3Q12788 808 aaKnown RBP16.43■□□□□ 0.22
CLN5-218ENST00000637397 ITGA9Q13797 1035 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 PGM5Q15124 567 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 WDR49Q8IV35 697 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 PDE5AO76074 875 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 PDK4Q16654 411 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 C6orf10Q5SRN2 563 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 N4BP2L1Q5TBK1 243 aaPredicted RBP16.43■□□□□ 0.22
CLN5-218ENST00000637397 BNC2Q6ZN30 1099 aaPredicted RBP16.43■□□□□ 0.22
CLN5-218ENST00000637397 FAM131BQ86XD5 332 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 ATPAF2Q8N5M1 289 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 ZNF184Q99676 751 aaPredicted RBP16.43■□□□□ 0.22
CLN5-218ENST00000637397 HACD3Q9P035 362 aa16.43■□□□□ 0.22
CLN5-218ENST00000637397 PSMG1O95456 288 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 AVPR1AP37288 418 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 BMT2Q1RMZ1 405 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 HYIQ5T013 277 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
CLN5-218ENST00000637397 BANF1O75531 89 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 INPP1P49441 399 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 PEX5P50542 639 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 MAMLD1Q13495 774 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 PPP2R3CQ969Q6 453 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 CNDP1Q96KN2 507 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 TCRBV7S2A1N4TA0A589 114 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 ACADSBP45954 432 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 NAT9Q9BTE0 207 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 SNX13Q9Y5W8 968 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 V9GYQ6 96 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 GAKO14976 1311 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 GNL1P36915 607 aaPredicted RBP16.42■□□□□ 0.22
CLN5-218ENST00000637397 STX5Q13190 355 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 LAMB3Q13751 1172 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 NFIL3Q16649 462 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 IL31Q6EBC2 164 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 MPZL3Q6UWV2 235 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 STRA8Q7Z7C7 330 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 SLC9A9Q8IVB4 645 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 CLEC4FQ8N1N0 589 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 PABPC5Q96DU9 382 aaKnown RBP16.42■□□□□ 0.22
CLN5-218ENST00000637397 WNK4Q96J92 1243 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 CEP19Q96LK0 163 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 TBC1D23Q9NUY8 699 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLN5-218ENST00000637397 IL1RAPL1Q9NZN1 696 aa16.42■□□□□ 0.22
CLN5-218ENST00000637397 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 FAM237BA0A1B0GVD1 139 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 M0QYT0 321 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 CSDE1O75534 798 aaKnown RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 SEL1L3Q68CR1 1132 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 CCNJLQ8IV13 435 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 RMDN1Q96DB5 314 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 TMEM176AQ96HP8 235 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 EGFL8Q99944 293 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 DPP3Q9NY33 737 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 GRIN2DO15399 1336 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 MON2Q7Z3U7 1717 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 FOXO6A8MYZ6 492 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 LIASO43766 372 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 HBP1O60381 514 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 CDH8P55286 799 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 NAPEPLDQ6IQ20 393 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 JADE3Q92613 823 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 CEP41Q9BYV8 373 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 THAP1Q9NVV9 213 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 A8MUI8 341 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 MAGEB2O15479 319 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 NPTXRO95502 500 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 ALADP13716 330 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 TTC33Q6PID6 262 aaPredicted RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 MAP3K20Q9NYL2 800 aaKnown RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 AP4E1Q9UPM8 1137 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 PEAK1Q9H792 1746 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 NID2Q14112 1375 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 ASB14A6NK59 587 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 KRT36O76013 467 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 PSMC3P17980 439 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 PPARGP37231 505 aaPredicted RBP16.41■□□□□ 0.22
CLN5-218ENST00000637397 SLC1A6P48664 564 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 HDAC4P56524 1084 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 RBBP7Q16576 425 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 RNF148Q8N7C7 305 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 PCDHB18PQ96TA0 734 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 MYOZ2Q9NPC6 264 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 NSMCE4AQ9NXX6 385 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 MCM8Q9UJA3 840 aa16.41■□□□□ 0.22
CLN5-218ENST00000637397 ZNF189O75820 626 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms